Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1395 ATGTTTTCTATTAGGCTAATCCTTCTTTCCACACTTTCTTGGATTCTGATAATTAATCAGACATATTCCAAGAATGATCGGAAGACATACATTGTGTACATGGGTGATCATCCTGAAGGCATGGACCCCGCATCCTTACCTTCTCTTCATATGACCATGGCTCAAAAGGTCCTTGGCAGTGACTTTAAGCCAGAAGCTATACTTCACAGCTATAAGAAGAGCTTCAATGGATTTGTGGTGAAGTTAACAGAAGCGGAGGCGGAAAGAATGGCAGAAATGGACAAGGTTGTCTCTGTTTTCCAAAATAAGAAGAATCGTCTCCGGACGACTAGATCGTGGGATTTCATAGGCGTTTCAAAGGAAGCCAAAAGATCAAGTATGGAGAGTGACATAATTGTTGGAGTAATAGACACAGGTGTTTGGCCAGACTCTAAGAGCTTCAGTGACCAAGGATTTGGTCCTCCACCCAAAAAGTGGAAGGGATCATGCCACAACTTTACCTGCAACAACAAAATAATTGGAGCAAAATACTTCAGCATGGATGTTGATGAGTATGACAAAGCTGACATCGTATCTCCTAAAGATGCAGATGGGCACGGGTCACACACTGCATCCACAGCTGCTGGAAATTGGGTTGACTCCGCAAGTCTATTTGGCTTTGCTGCAGGAACAGCCCGTGGAGGAGTTCCATCAGCACGCATCGCTATCTACAAAACATGTTGGAAGAGTGGTTGTGGTAATGCTGACACCCTTGCAGCATTTGATGATGCAATTGCTGATGGAGTAGATGTTATTTCAATTTCAACTGGACCCAATGAAATCCATCGTTATTTTGATCATCCTATTGATATAGGAAGTTTCCATGCAATGAAAAGAGGCATATTAACATCACATGCTGCTGGTAATGACGGTCCAAGTGCTAGCTCTATGACAAATTATTCACCCTGGTTGCTTTCAGTGGCAGCTAGCACTATTGGTAGAAAGTTCCTTACCAAGGTCCAGTTGGGAAACGGCATGGTTTTTGAGGGGGTTTCATTTAACACTTTTGATCTCAAAAACAAAATGTTTCCATTGGTTTACGCTGGAGATGTGCCCAACACTGCTGCTGGATATAATAGTTCTATCTCCAGGTTTTGCTTCGATAAATCTGTGGTTAAAAGTTCGGTGAAGGGAAAGATCGTTATATGTGATGGCTTCCGAAACGCTGAAGACGTAGGGTTTTTATCTGGGGCAGCTGGGATGCTAGTTGGAAGCACTGGAAATAAAGATATCCCACCTATACTTGCTATTCCCCTGTCTTGGCTTAGTCAAAAGAATATTAATAGCGTTTTTTCTTACTACAGTGCTTCAAGGAGTAATTCAACAGCCACAATATTTAGGAGTGCTGAAATCAATGATCCAGTAGCCCCTTACATAACTGCGTTCTCATCAAGAGGTCCAAATCCAATTACGCCAAACACTCTCAAGCCTGATCTGGCTGCCCCAGGATCTAACATTCTAGCAGCATATTCTCCTCGCAACCCACTTTCAGAATTTAAAGGAGACAAAAGAGGAGTTCTATACAATGTAATCTCAGGCACTTCTATGGCTTGCCCTCATGCATCTGGAGCAGCTGCATATGTCAAATCATTTCACCGCAATTGGTCTCCTGCTATGATCAAGTCTGCGTTAATGACCACCGCTACTCCAATGAGTCCTTCTCTCAATCCTGATTTTGAATTGGCATATGGCGCGGGGCAAATGAATCCCGTTAAGGCAGCAAATCCTGGTTTAGTGTATGATATTAGCGAAGCAGATTATATCAAGTTCTTGTGTGGAGAGGGTTTAACAGATAAACAACTCCGAACTCTCACAAAAGATCATAGTACTTGTAGCAAACATGCTAAAAAGGAAGCTGTATACGATCTCAATCTCCCATCATTTGCACTTCATATAAACGTTTCATCTTTCAGTCGTGTTTTCCATAGATCGGTTACAAATGTGGGATCAGAAACATCTAGTTATCAAGCCAAAGTGGTATCTCCATCTTTGTTAGATATCCAAGTGAAACCAAGTGTTTTGTCCTTCACATCAATTGGGCAGAAGAAAGCATTCTCTGTCATAATTGAAGGGAGCATTAATGTGGATATACTCTCTGCTTCTTTGGTTTGGGATGATGGCACTTTTCAAGTTAGAAGCCCTATTGTAGTGTACGGAGACTCCCAATAA 2208 0.4207 MFSIRLILLSTLSWILIINQTYSKNDRKTYIVYMGDHPEGMDPASLPSLHMTMAQKVLGSDFKPEAILHSYKKSFNGFVVKLTEAEAERMAEMDKVVSVFQNKKNRLRTTRSWDFIGVSKEAKRSSMESDIIVGVIDTGVWPDSKSFSDQGFGPPPKKWKGSCHNFTCNNKIIGAKYFSMDVDEYDKADIVSPKDADGHGSHTASTAAGNWVDSASLFGFAAGTARGGVPSARIAIYKTCWKSGCGNADTLAAFDDAIADGVDVISISTGPNEIHRYFDHPIDIGSFHAMKRGILTSHAAGNDGPSASSMTNYSPWLLSVAASTIGRKFLTKVQLGNGMVFEGVSFNTFDLKNKMFPLVYAGDVPNTAAGYNSSISRFCFDKSVVKSSVKGKIVICDGFRNAEDVGFLSGAAGMLVGSTGNKDIPPILAIPLSWLSQKNINSVFSYYSASRSNSTATIFRSAEINDPVAPYITAFSSRGPNPITPNTLKPDLAAPGSNILAAYSPRNPLSEFKGDKRGVLYNVISGTSMACPHASGAAAYVKSFHRNWSPAMIKSALMTTATPMSPSLNPDFELAYGAGQMNPVKAANPGLVYDISEADYIKFLCGEGLTDKQLRTLTKDHSTCSKHAKKEAVYDLNLPSFALHINVSSFSRVFHRSVTNVGSETSSYQAKVVSPSLLDIQVKPSVLSFTSIGQKKAFSVIIEGSINVDILSASLVWDDGTFQVRSPIVVYGDSQ* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1395 735 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 108 IPR037045 -
Apr1g1395 735 Gene3D - 604 732 - -
Apr1g1395 735 SUPERFAMILY Subtilisin-like 107 591 IPR036852 GO:0004252|GO:0006508
Apr1g1395 735 Gene3D Peptidase S8/S53 domain 130 600 IPR036852 GO:0004252|GO:0006508
Apr1g1395 735 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Apr1g1395 735 PRINTS Subtilisin serine protease family (S8) signature 195 208 IPR015500 -
Apr1g1395 735 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Apr1g1395 735 ProSiteProfiles Serine proteases, subtilase domain profile. 112 587 - -
Apr1g1395 735 PANTHER PUTATIVE-RELATED 19 732 - -
Apr1g1395 735 Pfam Peptidase inhibitor I9 29 107 IPR010259 -
Apr1g1395 735 Pfam Subtilase family 129 579 IPR000209 GO:0006508|GO:0008236
Apr1g1395 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 732 IPR045051 -
Apr1g1395 735 Gene3D - 326 465 - -
Apr1g1395 735 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Apr1g1395 735 CDD Peptidases_S8_3 107 562 IPR034197 -
Apr1g1395 735 CDD PA_subtilisin_like 333 458 - -
Apr1g1395 735 Pfam Fibronectin type-III domain 635 730 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1395 Apr-Chr1 23076274 23081080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1395 26 734 Subtilisin-like Serine Gene Family AT5G59100 47.376 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1395 - - gmx:100787973 1110.13