Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1364 ATGGCTGTTAACATTATTGGAGCAGTCGCGGGTGTAATGAGCTGTCTCTGTGCACATAACTGTTTCCATGAATCTCTTGGCCATCAGATTAGGCACCTTAGAAGACCCAAAAGGAACTTGAACAAGCTCAAATCATTGAAGGAAGAGTTAGATGCCCGGAAGGTGGATGTGTGCACCAAGCTAAATCAAATGTGGCTTCAAAAGGGGATGAATCCCAAGTCAGCAGTAGAACTGTGGCTTAAAAATGTTGATAAGATTGCAAGTGAAATAAATGAACTCACCAGGAAAATTGAACAAAATGGACCCTCACCAATTTATATTTGTTCAAGGATGAAGTTGGGGGAACTTATTGAGAAAAAGATCTTCGAGGTGAGAGAGGTTCTAGAGAAGGGTCAGTTTGCTGATGATAATACATTGGCTGAAACTTCACCCAGAAAAGGGCATCCTCTTCCCATTGCAAGGTTGATGGAACATGGATCAACCATGATAAGTTTAAACAGAATTTGGAACTACATAATGGATGATAGAGTGAGAAAAATTGGTGTTTATGGGATGGGAGGAGTGGGAAAAACCACAATCATGACTGAAATCAACAACAGTCTACTAAGAGAGAATAGACTTTTTGATAGTGTTATTTGGGTTAGTGCTTCAAAGGAAATGATCCATGAGCAATTACAAAAGATTATTGCTGAGAAGTTTGATATGGATCTTTCAGGATTTCAGGATGAAACTACAAGAGCTGCTGCACTCTTTGAAGCTTTTGAAAGAAGGAAAAGATTTGCCTTGATTCTAGATGATCTATGGGAACCATTCTCTCTTGAAAGAGTTGGAATACCCATTCCAACCATAGAGAATGGTTGCAAATTACTAATAACTACTCGAAAGTTAAGTGTTTGCCGAGGCATGGAAACAGATAGGGATGAGAAGGTGAAGGTTCTTGCAGACAATGAAGCTTGGGATCTCTTCAGGGACAAAGTTGGAGATGTGGCATTGGCCTCGCCAGATATACAAAGACTTGCAAAACATGTGGCACAAGAATGTATGGGTTTGCCTCTTGGTATTGTTACTGTGGGGCGTGCCTTGAGAAATGCAACTGATATTTCAGAATGGGAGATTTCATTGATGGCTTTAAAAGCTTCAACTGTCAATATAGAACAAATGGAAGAATCAGTTTTTTCTCGTTTAAAGTTCAGTTTCACAAAATTGAAGGATGACACAAGTAGATCTTGCTTTCTTTTCTGTGCTCTGTACCCAGAAGGTGATCACATTGATACAAATGAATTGATTGAATATTGGATGTGGGAAGGTATACTAGGTACTATGGATAACATAGCAGCAAGCAAACAAAAGGGGAGAATAATTTTGAATGAACTGAAATATGCATGCATGTTGGAAAATGCCACTGAAAATGCAGTGGAATGTGTCAAAATGCATGACTTAATAAGAGATATGGCCATTACTATCATGAGAACAGATCCTTGTTGGCGCTGCATTGTCAAAGCAGGCAGTGGACTGACAAAACCTCCACATATTGATGAGTGGATAGAAGATGTTCAAAGGGTATCACTAATGAAAAATGACTTGAAAAATATCTATCTTGGCAATCCTCCAGTGTGTTCAGGTGTCACTTCCTTGTTATTGCAATACAATTCTTTTGCTCAAAATATGCCATATAATTTCTTTGATTTCATACAAAGCCTAAAAATTCTTGATCTCTCTTACACTGGATCGATTCCCTGCCTGGATCGGTTTCTAACTTGGTGA 1764 0.3889 MAVNIIGAVAGVMSCLCAHNCFHESLGHQIRHLRRPKRNLNKLKSLKEELDARKVDVCTKLNQMWLQKGMNPKSAVELWLKNVDKIASEINELTRKIEQNGPSPIYICSRMKLGELIEKKIFEVREVLEKGQFADDNTLAETSPRKGHPLPIARLMEHGSTMISLNRIWNYIMDDRVRKIGVYGMGGVGKTTIMTEINNSLLRENRLFDSVIWVSASKEMIHEQLQKIIAEKFDMDLSGFQDETTRAAALFEAFERRKRFALILDDLWEPFSLERVGIPIPTIENGCKLLITTRKLSVCRGMETDRDEKVKVLADNEAWDLFRDKVGDVALASPDIQRLAKHVAQECMGLPLGIVTVGRALRNATDISEWEISLMALKASTVNIEQMEESVFSRLKFSFTKLKDDTSRSCFLFCALYPEGDHIDTNELIEYWMWEGILGTMDNIAASKQKGRIILNELKYACMLENATENAVECVKMHDLIRDMAITIMRTDPCWRCIVKAGSGLTKPPHIDEWIEDVQRVSLMKNDLKNIYLGNPPVCSGVTSLLLQYNSFAQNMPYNFFDFIQSLKILDLSYTGSIPCLDRFLTW* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1364 587 Gene3D - 312 398 IPR042197 -
Apr1g1364 587 PANTHER DISEASE RESISTANCE PROTEIN RP 122 578 IPR044974 GO:0006952
Apr1g1364 587 PRINTS Disease resistance protein signature 179 194 - -
Apr1g1364 587 PRINTS Disease resistance protein signature 254 268 - -
Apr1g1364 587 PRINTS Disease resistance protein signature 347 361 - -
Apr1g1364 587 PRINTS Disease resistance protein signature 562 578 - -
Apr1g1364 587 PANTHER - 122 578 - -
Apr1g1364 587 Gene3D - 399 487 IPR036388 -
Apr1g1364 587 Coils Coil 76 96 - -
Apr1g1364 587 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 414 IPR027417 -
Apr1g1364 587 SUPERFAMILY L domain-like 476 578 - -
Apr1g1364 587 Pfam NB-ARC domain 165 399 IPR002182 GO:0043531
Apr1g1364 587 Gene3D - 145 310 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1364 Apr-Chr1 22619187 22620950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1364 177 572 WRKY Transcription Factor Family AT5G45050 21.411 1.61e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1364 - K13459 aprc:113852063 1156.74