Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1356 ATGCAGACAAGGTATATGGAGAGATCGAATAGTATGGCGAGGGAGAAGCGAAGCTTAGATTCAGGTTCGGGTGAGGAAGACCAACCTGAAAGGAAGCGACCTGCGTTGGCTAGTGTAATTGTTGAAGCCCTGAAGATGGACAGTCTGCAGAAACTTTGTTCATCACTGGAGCCTATTCTACGTAGAGTTGTTAGCGAAGAAGTAGAGCGTGCTTTAGCGAAATTAGGCCCTGCCCAGCTTAGTGGGAGGTCTTCTCCCAAACGCATAGAAGCCCCTGATAACAGCAGTCTACAATTACAATTCAAGACCAGGTTATCGCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGAGAGCATGGCACTGCGATACATATTGTTTTGGTTGATGTAAAAACAGGACATGTTGTCACATCTGGCCCAGCTTCATGTGTCAGATTGGATGTTATTGTACTTGAAGGAGATTTCAATACTGAGGATGATGATAATTGGAATGAAGAAGAATTTGAGAGTCATGTAGTTAAAGAGCGAGAAGGAAAAAGACCTCTTCTGACTGGTGATCTGCAAGTGACACTGAAGGAGGGTGTGGGAACACTGGGTGAGCTTACATTTACTGACAACTCTAGCTGGATAAGGAGTCGGAAGTTCAGGTTGGGGCTGAAAGTTTCCTTAGGTTGTTGTGAAGGAACTCGAATTCGTGAAGCCAAAACAGAGGCTTTCACGGTTAAGGATCACCGTGGAGAATTATACAAGAAACACTACCCACCTGCCTTGAATGACGAGGTCTGGAGATTGGAGAAGATAGGCAAGGATGGATCCTTTCACAAAAGGCTAAATAAAGCAGGAATATATACTGTTGAAGATGTCCTACGACTTGTGGTCAGAGATCCTCAGAGATTGAGAAATATTCTTGGGAGTGGCATGTCAAACAAAATGTGGGATGCTCTTATTGAGCATGCAAAGACTTGTGTCCTCAGTGGAAAACTCTATGTATACTATCCTGAAGATGCAAGGAATGTTGGTGTTGTTTTCAATAACATCTATGAGTTGAGTGGTTTAATTGCTAATGACCAATACTACTCTGCTGATTCTCTCTCCGACAGTCAAAAGGTTTACGTGGACACATTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTACTAAATTACAATCAGACTAAGACTTTGGTCACCTCCCAACCTCAGGCTCCAATGGATTCCCATGATTATTCAAATTCAAACTCACTTGATCAACAGATCTCCATCCCAAGTCTACCACTTCCTGTATCTACAGGGCAGCCTTCAATGGATCCAGGAGTAGCAGTTGGAGGTTATCATAATGGGACAACTACCGGATGCTCAATGCAACCACAGAATGATAATACTAATTCTTCTTTTCACTTTGATAATACTGCATTCCCACTACAAAACCAGCTAATGAGTGCTTCAGACCAATCCCTACTTCCAAGAAATGAAAATGGGTTGACGGTTTGTCCACGGCAATCCACCGCTTCAGGCTTTCAGACTGTAAGCAATCCTACTTATAAAGGATTTGAGGACTTCTTCCCGGAGGAGGAGATTCGAACTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCATCTTCTCCGTATTTTTAATATGGGAGGGCAATCTCATACTTCCTTTAATGCTCCTGAAGATGTGTACCCTTATTCATCTCCATACATGCCTACGACCTCCGTGGGCTACAACACAGATGATGAACGAACTCGTTCCTCAGGAAAGGCTGTTGTGGGCTGGCTCAAGCTTAAGGCGGCTTTGAGATGGGGAATTTTTATTCGGAAGAGAGCTGCTGAGAAACGGGCACAACTTGTTGAGTTGGAAGACTCGTAA 1899 0.4365 MQTRYMERSNSMAREKRSLDSGSGEEDQPERKRPALASVIVEALKMDSLQKLCSSLEPILRRVVSEEVERALAKLGPAQLSGRSSPKRIEAPDNSSLQLQFKTRLSLPLFTGGKVEGEHGTAIHIVLVDVKTGHVVTSGPASCVRLDVIVLEGDFNTEDDDNWNEEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVSLGCCEGTRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDVLRLVVRDPQRLRNILGSGMSNKMWDALIEHAKTCVLSGKLYVYYPEDARNVGVVFNNIYELSGLIANDQYYSADSLSDSQKVYVDTLVKKAYENWMHVIEYDGKSLLNYNQTKTLVTSQPQAPMDSHDYSNSNSLDQQISIPSLPLPVSTGQPSMDPGVAVGGYHNGTTTGCSMQPQNDNTNSSFHFDNTAFPLQNQLMSASDQSLLPRNENGLTVCPRQSTASGFQTVSNPTYKGFEDFFPEEEIRTRSHEMLENEDMQHLLRIFNMGGQSHTSFNAPEDVYPYSSPYMPTTSVGYNTDDERTRSSGKAVVGWLKLKAALRWGIFIRKRAAEKRAQLVELEDS* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1356 632 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Apr1g1356 632 PANTHER OS02G0177800 PROTEIN 1 630 IPR012416 GO:0005516
Apr1g1356 632 MobiDBLite consensus disorder prediction 9 33 - -
Apr1g1356 632 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Apr1g1356 632 PANTHER CALMODULIN-BINDING PROTEIN 1 630 - -
Apr1g1356 632 MobiDBLite consensus disorder prediction 1 33 - -
Apr1g1356 632 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1356 Apr-Chr1 22523836 22529620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1356 9 627 Calmodulin-binding Proteins AT5G57580 61.395 0.0 765
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1870 3 34652760 34660713 Apr1g1356 1 22523836 22529620 PCT