Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1343 ATGGCACCACCGTTCAATATGTCAGATAGATCAATAATTTGCTATACGCCAACCATGACAACAACAAATGGTTTATGGCAGGGAGATAACCCTTTAGATTATTCCCTCCCTCTCTTCATCTTGCAATTAACGTTAGTTGTTTCCGCCACACGTTTCTTTGTTTTCATCCTCAAGCCATTCCACCAACCTCGTGTAATTTCTGAAATCATGGGAGGATTGCTATTAGGTCCATCGGTGGTTGGTAGAAGTGAAAAATTTGCAAATTCTGTATTTCCATTGAAAAGTGTGATGGTGATGGAGACAATGGCAAACATAGGCCTCATATACTTCCTTTTCCTAATAGGGTTAGAGATGGACATTTCAATTATCAAACGCGCTGGGAAAAGGACTGCATCCATAGCTGTTGCTGGTATGGTATTGCCCTTTTTGGTTGGTGTTTACTCCTCATCTTTCTTAGATGAAAAAGACGAGAACATGAACCATGGAAGCTATGCCCTCTATCTTGGTATTGTTCTATCTGTGACAGCATTCCCAGTGCTTGCTCGAATGCTAGCTGAGCTAAAGCTCATCAACACAGACCTTGGAAAACTTGCTGTTTCAACTTCTCTCGTCAATGACGTGTGTGCATGGATGTTAATGGCTCTAGCTATTGCTTTGACACAGCAAAATACTAGCACTTGGGCCTCTCTGTGGGTTGTACTATCAAATATTGTTTTTGTTTTGTTCTGCTTTCTTGTTGTTAGACCAGCAGTGAATTGGTTGATCAAGAGAACCCCAGAAGGAAAACACTTCAGTGACTTCCAAATATGCGTTGTGCTCCTTGGTGTTATGATCTCAGCCTTTGTCACAGATGTGCTTGGAACACATTCTATTTTTGGAGCTTTTGTATATGGGCTAGTGATTCCAACTGGCCCACTTGGAGCTGCCATAATAGAAAAGCTAGAAGACTTTGTTTCTGGGCTTTTGCTTCCTCTCTTTTATGCCACTAGTGGGCTTAAGACTGATATCAGCTTGATCAGTGGAGCTCGTGCATGGACATTTATACTCATGGTGATTCCTCTCACTTTTATAGGCAAGATTGTTGGAACTCTTGGTATTTCACTCCTTTTCCAGATACCAAACCGTGATGGTGTTGTTCTTGGTTTACTTATGAACACTAAAGGCCTTATTGAAATAATTGTGCTCAATGTTGGGAGAGAACAAAAGGTCTTGAGTGACAAAATATTCTCAATTATGGTTATCATAACTCTCATAATGACAGCAATCGTTTCACCCATTGTGACATTAATTTATAAGCCGAGAAAAAGGCTCATACCTTACAAAAAGAGAACAGTGCAAAATTCAAGACTTGATGCAGAATTAAGGATGCTGGTGTGTATTCATGCCCCTAAAAATGTCCCCACAATAGTTAATCTCCTTGAAGCAACTTACCCTCACAAAAGGTCTCCAATATGTGCTTGTGTGCTCCACTTAGTTGAACTCACCGGTAGAGCTTCTGCCATGCTTGTTGTCCATGCTAACAGAGAATCAGGAGGCCCAGCGCTCAACAAAACACAAGCACAAACCGACCACATCATCACTGCATTTCAAAACTTTGAGGAACATGTAGGTCATGTCTCAGTCCAACCCTTGACAGCTATTTCCCCTTACTCTACCATGCATGAAGACATATGCAGTTTGGCAGAAGAGAAAAGGGTATCCATAGTCATCATTCCTTTCCATAAGCAGCAAGCAGTTGATGGAGAAATGAAAGACACAAATCCGGCTTTGAGAATGGTGAACCACAATTTATTACAGAATTCACCTTGCTCAGTTGGTATACTTGTGGATAGAGGCCTTAATGGATCCAACCGCTTAATTTCAAGTCAAGCATCTCACCAAGTGACTGTGTTATATTTTGGAGGACCAGATGATAGAGAAGCACTAGCTTATGGGTGGAGAATGTCAAGACATCCAAGGGTTCGCCTCACTGTCATGCATTTCATTCCAAGGGTGGATTTAACTGAGACTCAGGCTACAGATAAGTTTGATATAAGAGCAAACAGCATAAATAATTATATGGCTGAGAGCAAACTAGACGATGAATATATGAAAGAGTTCAAAATGGTGGCTGCAAAAGATTGCTCGGTTGTTTACATAGACAAGGTTGTGAGTAATGGAGAGGAAACAGTTTCGGCAATAAGATCAATGAACAATGCCAATGACTTGTTCATTGTTGGAAGAGGTCAAGGAGCAGCATCACCACTAACAGAAGGCCTAACAGATTGGAGTGAGTGCCCAGAGTTGGGAGCCATTGGTGATTTGCTAGCTTCTTCAGACTTTGAAACAACAGCTTCAGTGTTGGTGATGCATCAATATGTTGGGCAAGGGCCAGATGGGGAGGAAGTTTTTGCTTGTGAAAGACCATGGCAAACAAGCGAAATGTACGTTAACATGAAACAACAACAACAACATATGCAAAGATATACAGTGCCAATGGGAATGGGAAACTCTTTCTTATAA 2502 0.4125 MAPPFNMSDRSIICYTPTMTTTNGLWQGDNPLDYSLPLFILQLTLVVSATRFFVFILKPFHQPRVISEIMGGLLLGPSVVGRSEKFANSVFPLKSVMVMETMANIGLIYFLFLIGLEMDISIIKRAGKRTASIAVAGMVLPFLVGVYSSSFLDEKDENMNHGSYALYLGIVLSVTAFPVLARMLAELKLINTDLGKLAVSTSLVNDVCAWMLMALAIALTQQNTSTWASLWVVLSNIVFVLFCFLVVRPAVNWLIKRTPEGKHFSDFQICVVLLGVMISAFVTDVLGTHSIFGAFVYGLVIPTGPLGAAIIEKLEDFVSGLLLPLFYATSGLKTDISLISGARAWTFILMVIPLTFIGKIVGTLGISLLFQIPNRDGVVLGLLMNTKGLIEIIVLNVGREQKVLSDKIFSIMVIITLIMTAIVSPIVTLIYKPRKRLIPYKKRTVQNSRLDAELRMLVCIHAPKNVPTIVNLLEATYPHKRSPICACVLHLVELTGRASAMLVVHANRESGGPALNKTQAQTDHIITAFQNFEEHVGHVSVQPLTAISPYSTMHEDICSLAEEKRVSIVIIPFHKQQAVDGEMKDTNPALRMVNHNLLQNSPCSVGILVDRGLNGSNRLISSQASHQVTVLYFGGPDDREALAYGWRMSRHPRVRLTVMHFIPRVDLTETQATDKFDIRANSINNYMAESKLDDEYMKEFKMVAAKDCSVVYIDKVVSNGEETVSAIRSMNNANDLFIVGRGQGAASPLTEGLTDWSECPELGAIGDLLASSDFETTASVLVMHQYVGQGPDGEEVFACERPWQTSEMYVNMKQQQQHMQRYTVPMGMGNSFL* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1343 833 PANTHER CATION/H+ EXCHANGER 3 9 821 - -
Apr1g1343 833 Gene3D - 482 760 - -
Apr1g1343 833 PANTHER CATION/H + ANTIPORTER 9 821 - -
Apr1g1343 833 Pfam Sodium/hydrogen exchanger family 46 427 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr1g1343 833 Gene3D - 38 437 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1343 Apr-Chr1 22361381 22364332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1343 8 811 Antiporter Super Family AT2G13620 62.206 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1343 - - gmx:100800514 1337.4