Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1334 ATGGGATTCCCAAGTCACACTAGCTTGGTAAATGCTTTCTTGCTCGTATTTTCCATCGTTTTCCTGGGTTTGACCTTAGCCAGTGATACCATCACATCTTCTCAATCCATAAGAGACTCAGAGACAATAACCTCAAGTGACAGTGTCTTCAAACTTGGTTTTTTCAGCCCTGAGAATTCAACACACCGCTACGTTGGAATCTGGTATCTCTCTGACTCCAACGTCATATGGATAGCTAACAGAAACCAACCACTCCTAGATTCTTCAGGGGTTTTGAAAATATCTAAGGATGGAAATGTTGTGGTACTTGATGGGAAACACCAAGTTATTTGGTCGTCAAATGCGTCAAACACTTCAACACCAACCAATTCAACTGCTCAACTTTTACGTTCTGGGAATCTCGTGCTGCTAGATGACCGTACTGGACAAACAATATGGGAGAGTTTCAAACATCCTGCTGATGCAGCAGTGCCAACAATGAGGATCAGTGCTAACAGAATCACAGGTGAGAAAATAAGGTTTATATCAAGGAAAAGTGCTTCTGATCCTTCAACTGGCTACTTCTCGGCTACCCTTGAACGTTTGGATGCTCCAGAAGTATTTTTATGGATTAATGAAACTCGCCCTTATTGGAGAACTGGTCCATGGAATGGTAGGATCTTTATTGGGACACCATTAATGTCAACTGGGTATCTATATGGATGGAATGTAGGATATGAAGGGAATGAAACTGTTTATCTAACTTACAGTTTTGCTGATCCATCTGCGTTTGGAATCCTTACGTTGAATGAACAAGGAAAGATTAAACTGGAGAGATATTATAATGGAAAGCATGTGTTGACTCTGGTGTTGCAGAATTCTGATTGTGATGTTTATGGCACGTGTGGGGCATTTGGAAGCTGTAATGTGCAAAATTCACCAATCTGTAGCTGTTTGAGTGGATATGAGCCAAGGAATCCAGAGGAGTGGAGTAGGAAAAATTGGACTAGTGGATGTGTGATAAAGAAGCCACTCAAGTGTGAGAGGTTGAAAAATGGAAGTGCAGATGGCCAAGAAGATCAATTTTTGAAACTTGCATCCATGAAAGTTCCAGACTTTGCTGATAGGTTAGATGTTGAGGAAGGTCAATGTGGAATCCAGTGCTTGAAGAATTGCTCTTGTTTGGCATATGCATATGACGCTGGCATTGGTTGCTTGTATTGGAGTGGACACTTAATTGACTTACAACAATTCTCTAGCGGAGGAGTTGATCTCCACATCCGTCTTGCCCATTCAGAATTTCAATCCAGTATTGCACAAAATCATACGAGTAAAAGAAGAGACAAGAAATTAGTCATTGGAATAGTTACAATGGCAATTGGAATGATTGTCTTGGCCATATGTGCATATGTAACCATTCGAAGATATCACCTCCGGAAGAAAACTGCTAAACATTATCCAGAAAGTCGGAGTCAAAGAGTGAGTGAGGTCCAGAAACAAGTTAAACTGGATGAGCTACCGCTATTTGATTTTGAAGTTGTTGCAAATGCTACAAACTACTTTCACTTAGCCAATAAGCTTGGAAAGGGCGGTTTTGGTCCAGTGTACAAGGGATTATTGCCAGATGGTCAGGAAATTGCAGTGAAAAGACTCTCCAAAGCATCTGGACAAGGGCTAGAGGAATTCATGAATGAGGTGGTCGTGATTTCTAAGCTTCAACATCGCAATCTTGTTAAACTTCTTGGCTGCTGTATAGAAGGAGATGAAAAGATGTTGATCTATGAGTTCATGCCAAATAAAAGCTTGGATGCATTTATCTTTGATCCACTCCAGCGGAATCTTCTAGGCTGGACAAAACGTTTTAATATAATTGAAGGAATTGCTCGGGGTATACTTTACCTTCATAGAGATTCTAGATTAAAAATTATACATAGAGATTTGAAGGCAAGCAATATCTTGCTGGATGCGGAGATGAATCCAAAAATATCAGACTTTGGTTTGGCTAGAATATATAAAGGTGAAGATGAAATTAATACCAAAAGGGTTGTTGGCACATATGGCTACATGTCCCCTGAATATGCAATGGAAGGACTATTTTCTGAGAAATCAGATGTTTATAGCTTTGGAGTTTTGTTACTAGAAATTATTAGCGGGAAAAGAAACACTAGCTTTCGTAATGATGAACAATCTCTCAGCCTCATAGGATTTGCGTGGAATCTATGGAACGAAGACAACATTAGGTCCTTAATAGATCCAGAGATATTAGCTTCACACTCTGAGGATCAAATTTTGAGGTGCATCCACATAGCATTTCTATGTGTGCAAGAAGTTGCAAAAACAAGACCAACTATGACTACTGTAGTATCTATGCTTAATAGTGAGATTTCCCGTCTTCCTCCTCCTAAGCAAGTTGCATTCGTTCAGAAGCAGTATTCATCAAGTTTAGAGTCTTCTTCTCAGGAAAATCAGGGTAATTCCAACAACAATGTAACTCTTACTGAGATCCAAGGCAGATAG 2496 0.3986 MGFPSHTSLVNAFLLVFSIVFLGLTLASDTITSSQSIRDSETITSSDSVFKLGFFSPENSTHRYVGIWYLSDSNVIWIANRNQPLLDSSGVLKISKDGNVVVLDGKHQVIWSSNASNTSTPTNSTAQLLRSGNLVLLDDRTGQTIWESFKHPADAAVPTMRISANRITGEKIRFISRKSASDPSTGYFSATLERLDAPEVFLWINETRPYWRTGPWNGRIFIGTPLMSTGYLYGWNVGYEGNETVYLTYSFADPSAFGILTLNEQGKIKLERYYNGKHVLTLVLQNSDCDVYGTCGAFGSCNVQNSPICSCLSGYEPRNPEEWSRKNWTSGCVIKKPLKCERLKNGSADGQEDQFLKLASMKVPDFADRLDVEEGQCGIQCLKNCSCLAYAYDAGIGCLYWSGHLIDLQQFSSGGVDLHIRLAHSEFQSSIAQNHTSKRRDKKLVIGIVTMAIGMIVLAICAYVTIRRYHLRKKTAKHYPESRSQRVSEVQKQVKLDELPLFDFEVVANATNYFHLANKLGKGGFGPVYKGLLPDGQEIAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVKLLGCCIEGDEKMLIYEFMPNKSLDAFIFDPLQRNLLGWTKRFNIIEGIARGILYLHRDSRLKIIHRDLKASNILLDAEMNPKISDFGLARIYKGEDEINTKRVVGTYGYMSPEYAMEGLFSEKSDVYSFGVLLLEIISGKRNTSFRNDEQSLSLIGFAWNLWNEDNIRSLIDPEILASHSEDQILRCIHIAFLCVQEVAKTRPTMTTVVSMLNSEISRLPPPKQVAFVQKQYSSSLESSSQENQGNSNNNVTLTEIQGR* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1334 831 Gene3D Phosphorylase Kinase; domain 1 472 589 - -
Apr1g1334 831 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 19 830 - -
Apr1g1334 831 SMART blect_4 34 152 IPR001480 -
Apr1g1334 831 CDD PAN_AP_plant 337 423 - -
Apr1g1334 831 Pfam S-locus glycoprotein domain 211 318 IPR000858 GO:0048544
Apr1g1334 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 218 IPR036426 -
Apr1g1334 831 Pfam Protein tyrosine and serine/threonine kinase 515 784 IPR001245 GO:0004672|GO:0006468
Apr1g1334 831 SUPERFAMILY Protein kinase-like (PK-like) 499 813 IPR011009 -
Apr1g1334 831 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Apr1g1334 831 Pfam PAN-like domain 351 408 IPR003609 -
Apr1g1334 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Apr1g1334 831 MobiDBLite consensus disorder prediction 808 831 - -
Apr1g1334 831 CDD STKc_IRAK 520 785 - -
Apr1g1334 831 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Apr1g1334 831 Pfam D-mannose binding lectin 75 178 IPR001480 -
Apr1g1334 831 SMART serkin_6 514 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1334 831 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 830 - -
Apr1g1334 831 Gene3D - 24 150 IPR036426 -
Apr1g1334 831 CDD B_lectin 34 152 IPR001480 -
Apr1g1334 831 Gene3D Transferase(Phosphotransferase) domain 1 590 794 - -
Apr1g1334 831 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Apr1g1334 831 PIRSF SRK 3 831 IPR024171 GO:0004674
Apr1g1334 831 SMART ntp_6 350 422 IPR003609 -
Apr1g1334 831 ProSiteProfiles Protein kinase domain profile. 514 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1334 Apr-Chr1 22276526 22279990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1334 428 831 Receptor kinase-like Gene Family AT4G21410 50.361 7.45e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr1g1334 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1334 - - gmx:112998788 1389.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1334 1 22276526 22279990 Apr3g1890 3 34896939 34900698 PCT