Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1332 ATGGCCTCCATGATGATCACCACATACCAACGCATAGCCTTTGTGTTTTTCTTCTCCTTCCTCTGTTTCTACAACCTGTTTTCCCGTGCTGCAAGCTCCAGAATTAGGATCACACGGGGTGACATGATTAGAGACAGAGAGGGTGAAACGTTGGTATCAGAAAGTGTCAACTTCGTGATGGGTTTCTTCAGTTTGGATAACTCCTCTTCCCGTTACGTTGGGATTTGGTACTACGACATTCCTGGACCTGCTGTTATATGGGTTGCAAACAGAGACAACCCCATCAAAGACACTGCAGGCTCCATCACTGTTGCAAGGGATGGCAATTTGGTTGTTCTTGATGGAGGGATGAACCAAGTTTGGTCGAGCAATGTTTCCATTCAGAACAGCAATAACTCAGAAGCAGTGCTTCATGATGATGGCAATCTTGTTCTTTCAAGTGCTAAGAAAGAGGTGTGGCAAAGCTTTGAGAACCCAAGTGATACATATGTGCCTGGTATGAAAGTGCCAGTGGGTGTTCCGATGGGGAAGAGCTATGTGTTCACGTCATGGAAATCAGCAACGGATCCTTCACCTGGGAATTACACTATGGGGGTTGATCCTGAGGGGTTACCCCAGATAGTGGTGTGGGAGGGACAGAAAAGGAGATGGAGAAGTGGATACTGGGATGGTAGAATATTTCAAGGAGTGTATATGACAGGAGGTTTGCTCTATGGTTTTACACTTAATGGAGATGGTAGAGGAGGAAGGTACTTTATATACAACCCCTTGAATGGCACTGATAAGGTGAGGTTTCAAGTGGGGTGGGATGGGTATGAAAGGGAATTCAGGTGGAATGAGGCTGAGAAACATTGGAGTGAGATTCAGAAAGGGCCTTTGAATGATTGTGAGGTTTATAACAAGTGTGGCAGTTTTGGAGCTTGTGATTTGTCCACTTCGGGTTCACCTGTTTGTAGCTGTATAAGAGGGTTTGAGCCAAAGCATAGGGATGAGTGGGATAAGGGGAATTCGTCTGGTGGGTGTGAGAGGATCACTCCACTCAAGGCTCAGAGGAATGCTACTTCTGGGACTGAGGTTAGTGTTGGAGAAGATGGTTTCTTTGATCGTAGGTCTATGAAGTTGCCCGACTTTGCACGTGTGATTAGCACGGATGATTGTGAGAGTGATTGTTTGAAGAATGCTTCTTGCACTGCCTATGCAAATGTTCTTGGGATTGGGTGCATGGTTTGGTATGGGGAGTTGGTCGATATTCAACACTTTGAAAATGGAGGAAATACACTGCACATTCGTCTCGCTGATTCTGAGTTAGGTGATGGAAGAAGAAAGAACAGGATTGTGATCATATCAGCTGTTGTGGCAGGATTAATCTGCCTTGGAATCTTTGTATGGCTGGTATGGAGGTTCAAGGGAAAACTTCAAGTTTTGCCTACAGTTTCCTCAGCTTCATGCTGCAAGAATAGTGATGTACTGCCAGTCTTTGATGCAAGCAAGAGCAGAGACATGTCAGCAGAATTTTCAGGATCCGCTGATCTTAGTTTGGAGGGGAACCAACTAAGTGGACCAGAGTTTCCACTTTTCAATTTTAGTTGCATTTCAATTGCCACAGACAATTTCTCAGAAGAAAATAAGCTCGGGCAAGGGGGCTTTGGTCCTGTCTACAAGGTAAAAATGCTTCCTTTTATTCCCATCTTTCATTTAAAATGTAATAAAATTATTTGTTCCATTTCCCAGGGAAAGCTTCCAAGTGGAGAACAAATAGCTGTTAAGAGGCTTTCAAGACGGTCTGGCCAAGGGTTAGAAGAGTTCAAGAATGAAATGATGCTGATAGCCAAACTACAACACAGAAATCTGGTTAGACTAATGGGTTGTTCTATTCAAGGGGACGAGAAGTTGCTGGTATATGAATACATGCCCAACAAAAGCTTGGATTGCTTTTTATTTGATCCAGTCAAACAAACACAACTAGACTGGAACAGACGCATTGAAATCATTGAAGGCATTGCGAGAGGATTGCTTTATCTGCACCGGGATTCAAGACTCAGAATAATTCACCGAGATTTAAAAGCAAGTAACATTTTGTTGGATGAAAACATGAACCCCAAAATATCAGACTTCGGCTTGGCCAGGATTTTTGGCGGGAACCAGAATGAAGCCAATACAAATCGAGTGGTCGGTACATACGGTTATATGGCACCTGAATATGCAATGGAAGGTCTGTTTTCAGTGAAATCTGACGTATATAGTTTTGGTATATTACTACTAGAGATTTTGAGTGGCCGAAGAAACACTAGCTTTCGTCAATCAGATGACTCAAGTCTCATAGGATATGCTTGGCATCTTTGGAATGAACATAGAGCAATGGAGCTAGTTGATCCTTGCATCCGTGCTTCTAGTCCTAAGAACAAAGCTTTGAGATGCATACACATAGGGATGTTGTGTGTGCAAGATTCAGCAGCTCATAGACCAACCATGTCTTCTGTGGTGTTGATGCTGGAGAGTGAAGCAACAGCTCTTCCCTTGCCTACGCAACCTTTGATTACTTCCATGAGGAGATCTGAGGACAGAGAATTTTATATGGATGGTCTTGATGTTTCAAATGATTTGACAGTCTCAATGGTGGTAGGGAGATGA 2631 0.4344 MASMMITTYQRIAFVFFFSFLCFYNLFSRAASSRIRITRGDMIRDREGETLVSESVNFVMGFFSLDNSSSRYVGIWYYDIPGPAVIWVANRDNPIKDTAGSITVARDGNLVVLDGGMNQVWSSNVSIQNSNNSEAVLHDDGNLVLSSAKKEVWQSFENPSDTYVPGMKVPVGVPMGKSYVFTSWKSATDPSPGNYTMGVDPEGLPQIVVWEGQKRRWRSGYWDGRIFQGVYMTGGLLYGFTLNGDGRGGRYFIYNPLNGTDKVRFQVGWDGYEREFRWNEAEKHWSEIQKGPLNDCEVYNKCGSFGACDLSTSGSPVCSCIRGFEPKHRDEWDKGNSSGGCERITPLKAQRNATSGTEVSVGEDGFFDRRSMKLPDFARVISTDDCESDCLKNASCTAYANVLGIGCMVWYGELVDIQHFENGGNTLHIRLADSELGDGRRKNRIVIISAVVAGLICLGIFVWLVWRFKGKLQVLPTVSSASCCKNSDVLPVFDASKSRDMSAEFSGSADLSLEGNQLSGPEFPLFNFSCISIATDNFSEENKLGQGGFGPVYKVKMLPFIPIFHLKCNKIICSISQGKLPSGEQIAVKRLSRRSGQGLEEFKNEMMLIAKLQHRNLVRLMGCSIQGDEKLLVYEYMPNKSLDCFLFDPVKQTQLDWNRRIEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGILLLEILSGRRNTSFRQSDDSSLIGYAWHLWNEHRAMELVDPCIRASSPKNKALRCIHIGMLCVQDSAAHRPTMSSVVLMLESEATALPLPTQPLITSMRRSEDREFYMDGLDVSNDLTVSMVVGR* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1332 876 Gene3D Transferase(Phosphotransferase) domain 1 637 838 - -
Apr1g1332 876 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 190 IPR036426 -
Apr1g1332 876 Pfam PAN-like domain 362 417 IPR003609 -
Apr1g1332 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 682 694 IPR008271 GO:0004672|GO:0006468
Apr1g1332 876 ProSiteProfiles EGF-like domain profile. 292 330 IPR000742 -
Apr1g1332 876 Gene3D Phosphorylase Kinase; domain 1 508 636 - -
Apr1g1332 876 ProSiteProfiles PAN/Apple domain profile. 361 432 IPR003609 -
Apr1g1332 876 SMART blect_4 42 159 IPR001480 -
Apr1g1332 876 SMART ntp_6 361 431 IPR003609 -
Apr1g1332 876 CDD B_lectin 48 159 IPR001480 -
Apr1g1332 876 Gene3D - 32 156 IPR036426 -
Apr1g1332 876 SUPERFAMILY Protein kinase-like (PK-like) 523 860 IPR011009 -
Apr1g1332 876 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 576 876 - -
Apr1g1332 876 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 4 557 - -
Apr1g1332 876 Pfam Protein tyrosine and serine/threonine kinase 541 829 IPR001245 GO:0004672|GO:0006468
Apr1g1332 876 ProSiteProfiles Protein kinase domain profile. 538 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1332 876 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 576 876 - -
Apr1g1332 876 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 4 557 - -
Apr1g1332 876 ProSiteProfiles Bulb-type lectin domain profile. 36 158 IPR001480 -
Apr1g1332 876 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Apr1g1332 876 CDD STKc_IRAK 544 832 - -
Apr1g1332 876 PIRSF SRK 5 876 IPR024171 GO:0004674
Apr1g1332 876 Pfam D-mannose binding lectin 85 185 IPR001480 -
Apr1g1332 876 CDD PAN_AP_plant 363 432 - -
Apr1g1332 876 SMART serkin_6 538 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1332 Apr-Chr1 22260663 22264615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1332 439 844 Receptor kinase-like Gene Family AT4G23230 49.386 1.58e-126 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr1g1332 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1332 - - aprc:113869342 1756.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1890 3 34896939 34900698 Apr1g1332 1 22260663 22264615 PCT
Apr1g1332 1 22260663 22264615 Apr3g1893 3 34920681 34928607 PCT