Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1331 ATGCTGGGTTTTTGTTCCTTCTTCTTTTGGTTCTTTTTCTCTCACGCTTTTTTCACCACAGTTTCATTCTCTGCGGACACCTTAACCTCAACACAAATCCTCAGAACCAACGAAACCCTCCTATCATCAAACCAGGTTTTTGTTCTGGGCTTCTTCACGGGTCTCAATTCCAACTTGTATTTGGGCATATGGTACAGCAACATTGACGATGGAACAGTCGTTTGGGTGGCAAACAGAGACAACCCACTTCAGAACTCCTCAGGATTTCTCAAAATCGGAGACAATGGAAACATGGTTGTCGTGAATCCATCAAAGAACCCCGTTTGGTTCTCCAACCAAACCACAGCTAAAAATCCCGTTCTTCAGCTTTTGAACACTGGGAACTTAGTTCTTAGAGAAGCAAACTTAAATGAAACCGATCCCACAAACACACAGTATCTATGGCAGAGCTTCGATTACCCAACAGACACACTGTTACCGGGAATGAAGATGGGGTGGAACTTGGACACGCGCACGGAGAAGCACATAACATCATGGAGTAACACAGGGGAAGACCCTTCAACCGGTAACTATTCTTTCAAGATGGATTATCGTGGGCTACCCGAAATTTTCTTGTGGTTCAACAATAAAACAAAAACATACAGAAGTGGGCCTTGGAATGGTGATAGATTCAGTGGGGTACCCGAGATGCAACCAGACACAGATTCTATCACGTTTAATTTTTCATCAGATCGACATGGAGTGTACTACTCCTTCTTCATTGGGAACCAATCGATATTTTCAAGGCTCATTGTTACTTCCTATGGTGAACTTCAGCGCCTAACTTGGGTACCAAGCAGCAAGACTTGGACAAAGTTTTGGTATGCACCTAAAGATCAGTGTGATGGGTATAGCGAGTGTGGTCCTTATGGAATATGTGACTCTAATGCTTCTCCGGTTTGCACGTGTATGAGAGGGTTCAGGCCTAAGAATCAGCAGGCTTGGAATTTGAGAGATGGGTCTGACGGGTGTGTGAGAAACACGGATTTAGATTGTGGAAGTGATAAGTTTTTGCATTTGCAGAATGTGAAGTTGCCAGAGACAAGTAATGTGTTTGTGAACAGGAGCATGAGCCTTGTGGAATGTGGAGATTTGTGCCACGGGAACTGTTCCTGCACTGCTTATGCTAACATTGAGATCACGAATGGAGGAAGTGGGTGTGTCATGTGGATTGGTGAACTCATAGACATGAGGCAGTATCCTGAGGGAGGCCAAGATCTCTATGTCAGATTATCAGCTTCTGATTTAGATAATGTAGGATCTGCAGGTGGCTCTCACAAGACAAACCGTAGAGCTGAGGTTGCAGGAATTACAATTTCTGTAGCTGTTATAATTTTGGGATTGGGTGTCATTTTATGTAAGAAGAGGAAAATGTTACGTATATCTAATGGCAAGAGAGAGAACAGAGGTCCTTTCCAAAGAAGTCGGGATTTGCTAATGAATGAGGTGGTGCTTTCAAGTAATAGAGAAAACTCGGGAGAAAGGAACATGGATGATCTAGAGTTGCCAATGTTTGATTTTAATACCATAACAATGGCTACAAACAACTTCTCTGAAGACAACAAACTTGGTCAGGGAGGCTTTGGCAGTGTTTACAGGGGTAGGTTGATAGAAGGCCAAGAGATTGCTGTCAAGAGGTTATCAAGAAACTCTGGCCAAGGAGTTGAAGAATTTAAGAATGAGGTCAAGTTAATTGTTAAGCTTCAACATCGAAATCTAGTTCGGCTTTTTGGTTGCTGCATTGAGATGGACGAGAAACTGCTGGTGTATGAGTACATGGAAAATAGAAGCCTTGATTCCATTTTGTTTGACAAAGCCAAAAAGCCCTTACTGGATTGGGAAAGGCGATTCAACATTATATGTGGAATAGCAAGAGGGATTCTTTATCTGCATCATGATTCCAGATTCAGGATTATCCATAGGGATCTCAAGGCAAGTAATGTTCTACTTGACAGTGAAATGAATCCAAAGATATCAGACTTTGGGATGGCTAGAATTTTTGGTTCCGATCAGACAGAAGCAAATACATTAAGGGTTGTTGGAACATACGGCTATATGTCTCCTGAATATGCTATGGATGGGAACTTCTCAGTGAAATCTGACGTTTTTAGCTTTGGAGTTCTAGTGCTGGAAATTATAAGTGGAAAGAAAAATAGAGGATTCTATTATTCGAACAATGACATGAATCTTCTAGGGAATGCATGGAAACTGTGGAAAGACGGCAGTGCATTGGAACTCATAGATTCGTCAGTTGGAGATTCATATTCGCCATCTGAAGTTCTTAGATGCATACATGTTGGGCTATTGTGTGTCCAAGAACGTCCAGAAGATAGGCCAACAATGTCTTCAGTGATGTTGATGCTGAGTAGTGAAACTTCATTAATGCCACAACCCAGAAACCCTGGCTTTTCCATAGGAAGGAATCCTGCAGAGACTGATTCTTCCTCAAGTAAGCAAGATGAATCATGGAGTGTGAACCAAGTCACAGTCACATTATTAGATGCTAGGTAG 2550 0.4216 MLGFCSFFFWFFFSHAFFTTVSFSADTLTSTQILRTNETLLSSNQVFVLGFFTGLNSNLYLGIWYSNIDDGTVVWVANRDNPLQNSSGFLKIGDNGNMVVVNPSKNPVWFSNQTTAKNPVLQLLNTGNLVLREANLNETDPTNTQYLWQSFDYPTDTLLPGMKMGWNLDTRTEKHITSWSNTGEDPSTGNYSFKMDYRGLPEIFLWFNNKTKTYRSGPWNGDRFSGVPEMQPDTDSITFNFSSDRHGVYYSFFIGNQSIFSRLIVTSYGELQRLTWVPSSKTWTKFWYAPKDQCDGYSECGPYGICDSNASPVCTCMRGFRPKNQQAWNLRDGSDGCVRNTDLDCGSDKFLHLQNVKLPETSNVFVNRSMSLVECGDLCHGNCSCTAYANIEITNGGSGCVMWIGELIDMRQYPEGGQDLYVRLSASDLDNVGSAGGSHKTNRRAEVAGITISVAVIILGLGVILCKKRKMLRISNGKRENRGPFQRSRDLLMNEVVLSSNRENSGERNMDDLELPMFDFNTITMATNNFSEDNKLGQGGFGSVYRGRLIEGQEIAVKRLSRNSGQGVEEFKNEVKLIVKLQHRNLVRLFGCCIEMDEKLLVYEYMENRSLDSILFDKAKKPLLDWERRFNIICGIARGILYLHHDSRFRIIHRDLKASNVLLDSEMNPKISDFGMARIFGSDQTEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIISGKKNRGFYYSNNDMNLLGNAWKLWKDGSALELIDSSVGDSYSPSEVLRCIHVGLLCVQERPEDRPTMSSVMLMLSSETSLMPQPRNPGFSIGRNPAETDSSSSKQDESWSVNQVTVTLLDAR* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1331 849 ProSiteProfiles PAN/Apple domain profile. 345 425 IPR003609 -
Apr1g1331 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Apr1g1331 849 PANTHER - 12 848 - -
Apr1g1331 849 Pfam S-locus glycoprotein domain 214 324 IPR000858 GO:0048544
Apr1g1331 849 SMART blect_4 31 154 IPR001480 -
Apr1g1331 849 Pfam PAN-like domain 345 410 IPR003609 -
Apr1g1331 849 PIRSF SRK 1 849 IPR024171 GO:0004674
Apr1g1331 849 Gene3D - 19 151 IPR036426 -
Apr1g1331 849 SMART serkin_6 530 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1331 849 CDD PAN_AP_plant 341 425 - -
Apr1g1331 849 SMART ntp_6 345 424 IPR003609 -
Apr1g1331 849 MobiDBLite consensus disorder prediction 820 838 - -
Apr1g1331 849 Pfam Protein tyrosine and serine/threonine kinase 533 798 IPR001245 GO:0004672|GO:0006468
Apr1g1331 849 CDD B_lectin 31 154 IPR001480 -
Apr1g1331 849 Pfam Receptor serine/threonine kinase 486 520 IPR022126 GO:0004674
Apr1g1331 849 ProSiteProfiles Bulb-type lectin domain profile. 25 144 IPR001480 -
Apr1g1331 849 Gene3D Phosphorylase Kinase; domain 1 504 605 - -
Apr1g1331 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 221 IPR036426 -
Apr1g1331 849 ProSiteProfiles Protein kinase domain profile. 530 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1331 849 MobiDBLite consensus disorder prediction 806 838 - -
Apr1g1331 849 Pfam D-mannose binding lectin 72 179 IPR001480 -
Apr1g1331 849 Pfam Domain of unknown function (DUF3403) 803 849 IPR021820 GO:0004674
Apr1g1331 849 CDD STKc_IRAK 536 801 - -
Apr1g1331 849 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Apr1g1331 849 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 848 - -
Apr1g1331 849 Gene3D Transferase(Phosphotransferase) domain 1 606 810 - -
Apr1g1331 849 SUPERFAMILY Protein kinase-like (PK-like) 509 801 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1331 Apr-Chr1 22250896 22256916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1331 518 844 Receptor kinase-like Gene Family AT4G11530 60.241 4.09e-138 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr1g1331 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1331 - - gmx:100797331 1367.06