Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1329 ATGAGAGTTTCCGCAACTACAAGCCTTGGTATCAACTTTTCACGGACCTTCACTTTCCTCACATTCTTTTCCAATACCGTTCTCTCCTTGGATACCTTAACTGCAACTCAATCTCTTGGAAGTAACCAAACTCTTGTGTCTCAACAGAAAGTGTTTGAGTTTGGCTTCTTTAACACTAGCAATTCCACATGGTACTTGGGCATATGGTACAAGGACTTTCCCGACAAAACATTGGTTTGGGTGGCAAATAGAGACACCCCACTTCGAAATTCCAATGGAACTCTCAAGATTGGAGACAAGGGAAACCTTGTTCTTCTTAATCAAACAGGAAACTCCATATGGTCACCACCAAATCAAACCACTGGTACCAACCCAATTCTTCAGCTTTTGGATACTGGGAACTTGATTCTCATAGAAGCAAACGAGAAAAACACCTCCAATTATCTGTGGCAAAGCTTTGATTATCCAACAGATACATTGTTACCAGGCATGAAGCTTGGCTGGAACCTTGACACTGGGGTGGAGCGCCGCATAACATCATGGAAGAGCCAAGATGATCCATCAAATGGGGATGCTTATTTCAGCCTAGAATATCATGGGATCCCAGATGTGTTCTTTTGGAACAAAAAGGAAAAAATTTTTAGAACCGGACCATGGAATGGTGAGAGGTTTGGAGGAGTACCAGTGCTAAACGTAATTGCTGTTCTTAATGATAAAGTAGTTGCTAATGAACATCATGTGTATTATGTCCCTTCAACACTCAACCAATCTCGTTTGTCAAGACTTGTTGTGAATTGGACAGGTTCAATTGAACGCTATGCATGGATAGAGAGCAGCAAAACGTGGAACAAGATATGGTTTGCACCTGCTGGAGATTGTGATCATTATGGATTGTGTGGTCCCTTTGGTATCTGTGACTCAAATGGTTTCCCTGTGTGCAAGTGTATTCAAGGATTCAATGTCAAGAATCAGCCGCAATGGGACTTGAGGAATTTTTCTGATGGGTGTGTTAAGAAGACAAAATTGGAATGTGGGAAGGACAGGTTTTTGCACATGACAAACGTGCAGTTGCCAGATACCACGAGGGTGTTTCTCAACAATAGCATGACCTTATTGGAATGTCGAAACACGTGCCTCAACAATTGCTCTTGCACTGCCTATGCTAATGCAGAGATTACTGGTGGTGGCTCTGGTTGCGTGATGTGGAGTGATAATCTCGTAGACGTGAGGCAGTTTTCCGAACTTGGCCAAGATCTCTTTGTCAGATTAGCAGCTTCTGATGTAGATGACAGTGGCACTGCCACAGGATCTGCTGGTGGCTCTAACAAGAATGTAGGAAAGATTGCAGGCATTGTAGTTACTGTAACATTTATAATTTTGGGAGTGAGTATATTCATTTTGTGGAGGAAAAGGAAATTGCAGAGTACATCTAAAGGGAATACTGGGAAGAGTGGTAATTTTGAAAGGGGTGAGACAACGCTGTTACCTGACACAATATTTTCAAATGATGGAGAACATTCAGATGAAAGGAGTATGGATGACAGGGAGTTGCCATTGTTCGATTTTAATACCATAAAAGAGGCTACAAACTTCTTCTCTTTAGCAAATAAACTTGGAGAAGGAGGCTTTGGAAGTGTTTACAAAGGTAGGTTGGTGAATGGCCAAGAAATTGCCGTTAAAAGGTTATCAACAAGCTCCGGGCAAGGAAATGAAGAATTCAAGAATGAGGTTAGATCAATTGCAAAGGTTCAACATAGAAATCTTGTAAGACTGTTTGGTTGCTGCATTGAGAAGGACGAGAAGATGTTGATCTATGAGTACATGGAAAATAATAGCCTAGACTCTATTTTATTTGACAAAGCAAAGAGTTCCAAACTAGACTGGCCAATGCGCTTCAACATTATATGTGGAATAGCTAGAGGACTTCTTTATCTCCATCATGATTCCAGGTTTAGAATTATCCATAGGGATCTCAAGGCAAGCAATATTCTACTTGATAGAGAAATGAATCCAAAGATATCAGATTTTGGAATTGCTAGAATTTTTGACAATGATCAAACACAAGCGAATACAAGGAGAGTTGTTGGAACATATGGTTATATGTCACCTGAATATGCATTGGGTGGATACTTTTCAGTAAAATCTGATGTTTTTAGTTTCGGGGTTCTTGTACTGGAGATCATAAGTGGCAAGAAGAACAGAGGATTTTATTCCTCAGAGGACATAAATCTTCTTGGGCATGCTTGGAGGCACTGGAAAGATGAGAGTGCGTTGGAACTGATAGATTCATCATTTGCTGATTCTTTTTCAGTCTCTGAAGTTCTAAGATGCATACATGTTGGGCTTATATGTGTCCAAGAACGAACAGAAGACAGGCCCACAATGTCTTCTGCGGTGTTGATGTTGAACAGCGAAACTGCATCATTGCCACAGCCCAAACACCCTGGTTTCATCCTTGCAAAGGGTCCTAAAGAAACTGATTCTTCTTCAGGTGTTCAAGACGAAATGCACACGATAAACCAAGTAACAGTTACAATAGTAGATGGCAGGTAG 2553 0.4097 MRVSATTSLGINFSRTFTFLTFFSNTVLSLDTLTATQSLGSNQTLVSQQKVFEFGFFNTSNSTWYLGIWYKDFPDKTLVWVANRDTPLRNSNGTLKIGDKGNLVLLNQTGNSIWSPPNQTTGTNPILQLLDTGNLILIEANEKNTSNYLWQSFDYPTDTLLPGMKLGWNLDTGVERRITSWKSQDDPSNGDAYFSLEYHGIPDVFFWNKKEKIFRTGPWNGERFGGVPVLNVIAVLNDKVVANEHHVYYVPSTLNQSRLSRLVVNWTGSIERYAWIESSKTWNKIWFAPAGDCDHYGLCGPFGICDSNGFPVCKCIQGFNVKNQPQWDLRNFSDGCVKKTKLECGKDRFLHMTNVQLPDTTRVFLNNSMTLLECRNTCLNNCSCTAYANAEITGGGSGCVMWSDNLVDVRQFSELGQDLFVRLAASDVDDSGTATGSAGGSNKNVGKIAGIVVTVTFIILGVSIFILWRKRKLQSTSKGNTGKSGNFERGETTLLPDTIFSNDGEHSDERSMDDRELPLFDFNTIKEATNFFSLANKLGEGGFGSVYKGRLVNGQEIAVKRLSTSSGQGNEEFKNEVRSIAKVQHRNLVRLFGCCIEKDEKMLIYEYMENNSLDSILFDKAKSSKLDWPMRFNIICGIARGLLYLHHDSRFRIIHRDLKASNILLDREMNPKISDFGIARIFDNDQTQANTRRVVGTYGYMSPEYALGGYFSVKSDVFSFGVLVLEIISGKKNRGFYSSEDINLLGHAWRHWKDESALELIDSSFADSFSVSEVLRCIHVGLICVQERTEDRPTMSSAVLMLNSETASLPQPKHPGFILAKGPKETDSSSGVQDEMHTINQVTVTIVDGR* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1329 850 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Apr1g1329 850 SUPERFAMILY Protein kinase-like (PK-like) 517 819 IPR011009 -
Apr1g1329 850 Pfam S-locus glycoprotein domain 214 322 IPR000858 GO:0048544
Apr1g1329 850 Gene3D Phosphorylase Kinase; domain 1 506 607 - -
Apr1g1329 850 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 849 - -
Apr1g1329 850 SMART ntp_6 344 423 IPR003609 -
Apr1g1329 850 CDD STKc_IRAK 538 803 - -
Apr1g1329 850 PIRSF SRK 3 850 IPR024171 GO:0004674
Apr1g1329 850 CDD PAN_AP_plant 340 424 - -
Apr1g1329 850 Pfam PAN-like domain 344 409 IPR003609 -
Apr1g1329 850 Gene3D - 26 153 IPR036426 -
Apr1g1329 850 PANTHER - 16 849 - -
Apr1g1329 850 Pfam Protein tyrosine and serine/threonine kinase 534 798 IPR001245 GO:0004672|GO:0006468
Apr1g1329 850 Gene3D Transferase(Phosphotransferase) domain 1 608 812 - -
Apr1g1329 850 ProSiteProfiles Protein kinase domain profile. 532 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1329 850 CDD B_lectin 36 156 IPR001480 -
Apr1g1329 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Apr1g1329 850 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Apr1g1329 850 ProSiteProfiles PAN/Apple domain profile. 344 424 IPR003609 -
Apr1g1329 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 187 IPR036426 -
Apr1g1329 850 SMART serkin_6 532 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1329 850 Pfam D-mannose binding lectin 77 182 IPR001480 -
Apr1g1329 850 Pfam Domain of unknown function (DUF3403) 804 850 IPR021820 GO:0004674
Apr1g1329 850 SMART blect_4 36 156 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1329 Apr-Chr1 22214042 22217433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1329 442 817 Receptor kinase-like Gene Family AT4G23190 52.850 5.25e-132 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr1g1329 PK_Tyr_Ser-Thr 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1329 - - aip:107621503 1204.89