Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1328 ATGAAACTTGGTAGGAACTTCAAAACTGGCTTGAACCGACATTTGACTTCCTGGAAAAGCAATTCTGATCCTTCTTCAGGAGAATACACTTATAGTGTGGATCCCCATGGCCTTCCTCAGCTTTTTCTTCGCAAGGGAAACAAGAAAGTCTTCAGAAGTGGACCATGGTATGGGCAACAATTCAAAGGTGATCCAGTTCTCAGTGCAAACCCGGTTTTCAAACCTATTTTTGTTTTTGATTCTGATGAAGTGTCTTACTCATATGAGACTAAGGACAACATCATTTCAAGATTTGTGCTCAGTGAGTCTGGTTTGATTCAGCATTTCTCATGGAATGACTATCATTCAAGTTGGTTCTCTGAGTTCACAGTTCAAGGGGACCATTGTGATGATTATGGCCTTTGTGGTGCTTATGGTACTTGTAACATCAAAAGCTCTCCGATTTGCAAGTGCTTGAAGGGTTTTGAGCCTAGGCTTCCACAAGATTGGGAAATGCTTGAGTGGTCGGGTGGATGTGTTAGGAAGAATTCTCAAGTTTGCAACAATGGAGATGCATTTAAGCAGTTTACAGGAATGAAACTACCAGATGCTGCTGAGTTTCATACAAACTATAGCATCAGCATTGATCATTGTGAAGCAGAATGCTCCAAGAACTGTTCTTGTGTAGCTTATGCTAAGTTAGATATAAATGCAAGTGGCAAAGGCTGTATTGCTTGGTTTGGGGATTTATTTGATATCAGAGAAGTTACTGTGAATGGGCAAGAATTCTACGTGAGAGTTCCAGCTTCAGAAATAGATTCAAATGTTGATGGAAACAAAAGAAAGAAACTCATACTGCTTCCTGTGACTGCATCTGTAACTTCAACAATTATTATATCAGCATTATGGTTGATAATTAAGAAATGCAGAAGAAAGGGAGCCCCCAAAGAGACAGGTATTCAGTTTAGTGTTGGCAGAGCTAAATGTGAGAGTAATGAATTTGAACTTCCATTATTTGAGATTGCCATAATTGAAGCTGCCACCAGGAATTTCTCTATTTACAGTAAGATTGGAGAAGGTGGATTTGGTCCTGTATACAAAGGCCAACTTCCATCAGGACAGGAAGTAGCAGTGAAAAGGCTCTCAGAGGGTTCAGGACAAGGCCTACAGGAGTTCAAGAATGAGGTTATTTTAATCTCCCAACTTCAGCATCGAAATCTTGTCAAGCTTCTAGGTTGTTGCATTACTGAAGAAGATAAAATGCTTGTCTATGAATACATGCCAAACAGAAGCTTGGACTCCTTATTATTTGATGAAACCAAGCGTTCTGTGCTCAGTTGGCAAAAGAGGCTAGTCATAATTATTGGCATCGCCCGGGGACTTCTCTACCTTCACAGAGATTCAGGACTAAGAATAATCCATCGAGACTTGAAAGCAAGCAATGTTCTTTTAGATAGTGAAATGAACCCAAGAATTTCTGACTTTGGAATGGCAAGAATGTTTGGTGGAGATCAAACTGAAGCAAAGACCAAGAGAGTAGTTGGAACCTATGGATATATGTCACCAGAGTACGCATTAGATGGAAACTTTTCTTTCAAATCAGATGTTTTTAGCTTTGGAGTTTTACTCTTGGAGCTGTTGAGTGGCAAGAAAAACAAAGGGTTTATTCACCCGGATCACAAACTGAATCTCCTAGGCCATGCATGGAAGCTGTGGAATGAAGGAAGGGCATTGGAGCTGATGGATCCATTGCTTGAGAATGAGCTTCCGACATCAGAAGTTGAAAGGTGCATTAAAGTGGGACTTTTATGCGTTCAACAGCATCCAGAAGAGAGGCCAACAATGTCGTCAGTGGTTTTGATGTTGGACAGTGAGAGTGTTTTGGTCCCTCAACCTGGAAGACCGGGATTATATTCAGAGAGATTTTTCTCAGAGACGGATTCATCATCACGTGCTAGACTCAATTCTGGTTCCAATGACATTACTGTTACTTTAATAGAGGGTCGTTAG 1989 0.4067 MKLGRNFKTGLNRHLTSWKSNSDPSSGEYTYSVDPHGLPQLFLRKGNKKVFRSGPWYGQQFKGDPVLSANPVFKPIFVFDSDEVSYSYETKDNIISRFVLSESGLIQHFSWNDYHSSWFSEFTVQGDHCDDYGLCGAYGTCNIKSSPICKCLKGFEPRLPQDWEMLEWSGGCVRKNSQVCNNGDAFKQFTGMKLPDAAEFHTNYSISIDHCEAECSKNCSCVAYAKLDINASGKGCIAWFGDLFDIREVTVNGQEFYVRVPASEIDSNVDGNKRKKLILLPVTASVTSTIIISALWLIIKKCRRKGAPKETGIQFSVGRAKCESNEFELPLFEIAIIEAATRNFSIYSKIGEGGFGPVYKGQLPSGQEVAVKRLSEGSGQGLQEFKNEVILISQLQHRNLVKLLGCCITEEDKMLVYEYMPNRSLDSLLFDETKRSVLSWQKRLVIIIGIARGLLYLHRDSGLRIIHRDLKASNVLLDSEMNPRISDFGMARMFGGDQTEAKTKRVVGTYGYMSPEYALDGNFSFKSDVFSFGVLLLELLSGKKNKGFIHPDHKLNLLGHAWKLWNEGRALELMDPLLENELPTSEVERCIKVGLLCVQQHPEERPTMSSVVLMLDSESVLVPQPGRPGLYSERFFSETDSSSRARLNSGSNDITVTLIEGR* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1328 662 Pfam Protein tyrosine and serine/threonine kinase 346 613 IPR001245 GO:0004672|GO:0006468
Apr1g1328 662 Gene3D Phosphorylase Kinase; domain 1 313 419 - -
Apr1g1328 662 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 660 - -
Apr1g1328 662 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 660 - -
Apr1g1328 662 CDD PAN_AP_plant 181 261 - -
Apr1g1328 662 Pfam PAN-like domain 180 246 IPR003609 -
Apr1g1328 662 SUPERFAMILY Protein kinase-like (PK-like) 327 625 IPR011009 -
Apr1g1328 662 SMART serkin_6 344 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1328 662 Pfam S-locus glycoprotein domain 51 158 IPR000858 GO:0048544
Apr1g1328 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Apr1g1328 662 CDD STKc_IRAK 350 616 - -
Apr1g1328 662 Gene3D Transferase(Phosphotransferase) domain 1 420 621 - -
Apr1g1328 662 ProSiteProfiles EGF-like domain profile. 125 161 IPR000742 -
Apr1g1328 662 ProSiteProfiles Protein kinase domain profile. 344 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1328 662 SMART ntp_6 181 260 IPR003609 -
Apr1g1328 662 Gene3D Hepatocyte Growth Factor 177 258 - -
Apr1g1328 662 ProSiteProfiles PAN/Apple domain profile. 180 262 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1328 Apr-Chr1 22206121 22209411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1328 258 651 Receptor kinase-like Gene Family AT4G05200 50.505 2.19e-125 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr1g1328 PK_Tyr_Ser-Thr 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1328 - - aprc:113864715 1353.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1894 3 34931875 34948275 Apr1g1328 1 22206121 22209411 PCT