Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1315 ATGCTTGAGGTCTGGCTTTCTCTCAAGAGAACACTTCAATGCAAACCACACCCAAATCAAATTCATGATCCAAAGACAAGTAAGAACCAAAAAAGTAATCATAGAACCAAGTCAGGTAAACTTGAGAGTTCAAATATCAAAGATTTCATCCACGGAAGCAAGAGGTATTCAAAAACTCCACCAAGTTCCAACCCAAAACCCAAAGGAAGCATTGACATCATCAATCCCATAACCCATGAAATTGTTCTTGATAGCTCGAACAGCAACATTTGTCGATGTTATCCTTGTCCTCAAAGCAATAGCAGCAGCAAAGGTTCAGAAGGTTCTCATAGAACAAGAAGGACAGCAGCATCTTCAAGGACAACCAATCATGTTGATTACAATGAAGCAAATGCCTCCTCCAACTCAAGGATGCTGGTTCAGATGGATCCTGACGGTTCTTCAATAATGATATGTCATAAATGTGGTGAGAAACTAAAAAATCTTGATGCGGTAGAAGCACACCATATCTCCGAGCATTCAGTCACTGAACTTCAAGAAGATTCATCCAGGCAGATAATAGAAATAATATGTGAAACAAACTCAGTTGATTCTGAAAGCATGTTGGGGCAGATTGATTGTATCTTAAAGGTCCAGAACATACCAAAAACCCTTGCTTGCTTTGAGGAATATAGAGAGATGGTGAAGGTCAAGGCTGAAAAACTACAGAAGAAGCACCCTCGTTGTGTGGCTGATGGAAATGAGCTTTTAAGGTTCCATGGCACAACTATTGCATGCTCTCTAGGCATAAATAGTTCTTATAAGTTGTGCACTTTAGAATATTGTGGAATATGTCAAATTATGAGGCATGGCTTCTCCACCAACAAGGAATTCCAAGGTGCATTAGGGGTTTACACCACTTCTACAAGTGGAAAAGCCTTTGATTCCATTATGACAACTGATGAGAGAATGTTTCTAAGGAAGTCTGTTATAGTGTGTAGAGTAATAGCTGGGAGAATTTATACTCCTCTTGAGGAAATTGAAGAAAAGGTTGATTCAGAGTTTGATTCATTGGCAGCAAAATTATATGGTCATTCTGATGTTGAGGAACTCTATGTATTGAATCCCAAAGCTCTACTCCCTTGCTTTGTGGTAATCTACAAACAACAAACAATGAAGGTTAAAAGGTTCAACTCAAGCTTGAGGACAAGTTTTAGATAG 1200 0.3892 MLEVWLSLKRTLQCKPHPNQIHDPKTSKNQKSNHRTKSGKLESSNIKDFIHGSKRYSKTPPSSNPKPKGSIDIINPITHEIVLDSSNSNICRCYPCPQSNSSSKGSEGSHRTRRTAASSRTTNHVDYNEANASSNSRMLVQMDPDGSSIMICHKCGEKLKNLDAVEAHHISEHSVTELQEDSSRQIIEIICETNSVDSESMLGQIDCILKVQNIPKTLACFEEYREMVKVKAEKLQKKHPRCVADGNELLRFHGTTIACSLGINSSYKLCTLEYCGICQIMRHGFSTNKEFQGALGVYTTSTSGKAFDSIMTTDERMFLRKSVIVCRVIAGRIYTPLEEIEEKVDSEFDSLAAKLYGHSDVEELYVLNPKALLPCFVVIYKQQTMKVKRFNSSLRTSFR* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1315 399 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 382 - -
Apr1g1315 399 Gene3D - 165 386 - -
Apr1g1315 399 MobiDBLite consensus disorder prediction 15 72 - -
Apr1g1315 399 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 382 - -
Apr1g1315 399 SUPERFAMILY ADP-ribosylation 208 382 - -
Apr1g1315 399 ProSitePatterns Zinc finger C2H2 type domain signature. 152 173 IPR013087 -
Apr1g1315 399 MobiDBLite consensus disorder prediction 98 121 - -
Apr1g1315 399 MobiDBLite consensus disorder prediction 21 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1315 Apr-Chr1 22057247 22058864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1315 4 381 C2H2 Transcription Factor Family AT5G54630 43.875 2.63e-116 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1315 - - gmx:100792577 556.599