Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1312 ATGGTGCAGAAGAAGCAGCAGCGCCCATCGCCTCTCGACGATCCACCCACAGCTTCGTCTTCCGATTCCGAGGAAGAAGAGCAACGACCTTCCTCCGAGCAACGCCACGCAGAGGATGAAGAAGTAGCTTCCTCCGAAGAGGAAGAGGATTCGTCCGAAGAAGACGATGACGATGATGAAGAACATAACCCCAAACCCGCTTCCCAAAACCCTCCACCCCCTCCCACTAACTCCCTCCCCAAACCCTCTTCATCCGAATCTGAAACTGACTCCGATTCCGGATCCGACTCCGAACCCGACCCCAACCCCAACCCCAAAGTGAAACCCCTCGCCTCCAAGCCCATGGAGCAGGCCCAAAAGCCCAAGGCTCATCCCTCTCCGACCCCGTCCAAGTCGGGATCGAAGCGCGCTGCCGAGAACCATGCTCACGTGACTGGCCCCAAACGTGCGAAGAAGAAAGCAACCGATTTTTCTGGTGGTGGTTCCGACGAGGAGGTGGAGGAGGATGGGAAGAAGTCAGGGGAGTTGTCGAAGAAGTTTCAGAGGATCTGGAGCGAGGAAGATGAACTCGCCATTCTTAAGGGTATGGTTGACTTCACTTCCAACACTGGTCAAGACCCTTTTAAGTACGCCAATGCCTTTCACGATTTCATGAAGAAGTCGCTTCATTTCGATGCTTCCAGCAACCAACTGAAGGAGAAGATTCGAAGGCTGAAGAAGAAGTTTGAGACCAATTCCGGCAAAGGGAAGAATGGAAATGGCCCTAAGTTCTCCAAACCGCACGACCAAAAATCTTACGAATTGTCCAAAAAGGTTTGGGGAAATGAACAAGTTGAAACAGCCAATGGGGCAATTGAAAAGGAAAAATCTAACGGGAAAGCTGCCAAGAGTCCTAAGAAGGAAGCTAGTGGTAGTAGGAATGTGGCTACTTCTGGCAAGAAATTGAAACCCGAAACGAAACCTGAACCTGAGCGGATATCTGAGGTTTTGACGGAATCTGGAAAAATGGACATTGATCCGAAGCCTGATGGTGATACAGGTTTGCTTTTGAGTGAAATGTTCTGTTATCAAAATGGTGGCGGGGGTGTTTATCGGCTGAATGAGGATGATGCCAAGAGGGGTTTGCAGTTAATTGGAGAATCAAAGAGGGCAGAGTTGGAGGCCAAGTGGAAGAAAATTCGAGCTGCAGAGATGAAGTTGTATGCAGATCGTGCACTACTGGTTGGGGAGCAGACTAGCTTGATTTTGGAGGCGCTTCAGCCATCCAACCATTAG 1275 0.5035 MVQKKQQRPSPLDDPPTASSSDSEEEEQRPSSEQRHAEDEEVASSEEEEDSSEEDDDDDEEHNPKPASQNPPPPPTNSLPKPSSSESETDSDSGSDSEPDPNPNPKVKPLASKPMEQAQKPKAHPSPTPSKSGSKRAAENHAHVTGPKRAKKKATDFSGGGSDEEVEEDGKKSGELSKKFQRIWSEEDELAILKGMVDFTSNTGQDPFKYANAFHDFMKKSLHFDASSNQLKEKIRRLKKKFETNSGKGKNGNGPKFSKPHDQKSYELSKKVWGNEQVETANGAIEKEKSNGKAAKSPKKEASGSRNVATSGKKLKPETKPEPERISEVLTESGKMDIDPKPDGDTGLLLSEMFCYQNGGGGVYRLNEDDAKRGLQLIGESKRAELEAKWKKIRAAEMKLYADRALLVGEQTSLILEALQPSNH* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1312 424 PANTHER STOREKEEPER PROTEIN-LIKE 11 421 - -
Apr1g1312 424 MobiDBLite consensus disorder prediction 136 178 - -
Apr1g1312 424 MobiDBLite consensus disorder prediction 81 100 - -
Apr1g1312 424 PANTHER BNAANNG10740D PROTEIN-RELATED 11 421 IPR007592 GO:0006355
Apr1g1312 424 Pfam Protein of unknown function, DUF573 180 274 IPR007592 GO:0006355
Apr1g1312 424 MobiDBLite consensus disorder prediction 22 41 - -
Apr1g1312 424 MobiDBLite consensus disorder prediction 42 61 - -
Apr1g1312 424 MobiDBLite consensus disorder prediction 255 269 - -
Apr1g1312 424 MobiDBLite consensus disorder prediction 1 178 - -
Apr1g1312 424 MobiDBLite consensus disorder prediction 1 18 - -
Apr1g1312 424 MobiDBLite consensus disorder prediction 66 80 - -
Apr1g1312 424 MobiDBLite consensus disorder prediction 240 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1312 Apr-Chr1 22039480 22042604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1312 83 418 GeBP Transcription Factor Family AT1G61730 31.445 1.34e-36 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Apr1g1312 DUF573 1.5e-35 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1312 - - gmx:100791520 408.297