Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1311 ATGGCTTCCCGCAACCAGAACAGGCCTCCTCGCAGCCCTTCCAACAAAAAGGGAGGTGCTGAAGAACTTCCCTCAGACAAACGTCGAAGAATTGGGGCAGAGAAGATGGAGCGACAGGGTCGAACCAGGGCTCCATTTGGGGCTCTCAGCAACAAAGCAGAAGCTAACGAAGTTGCCGGCGCCGAGGGCTCCGATTTTGCCACTGTTGAGTTCACCAAAGAGGACGTGGAGGCGTTGCTCAATGAGAAGATGAAAAAGGGAAATCCCTTTGATAATAAGAAAAAAATGGACCAGATGGCAGATCTCATAAAGCGTCTTAAACTCTGCGTTCGATGGTTTAAAAGAATTGAAGAAGGGTATATCCAAGAAAAAGAAAAGCTTCAGACTGAACTTGAATCTGCCCTGAAGAAATGCATTGACACTGGGAATGAGATGAAGGTTAAGATTGCTGAGTTGAATGAAACTATATCTAATTTGAGGACGACAATTTCCTCTTTAGAAGAGAGAATTGCAAAGGAAGAATCAGCTAAATTGGAAGCAATTGATTGTTATAGAAGAGAAAAGGAAGCTAGAAGTACAGCTGAGCAGATGCAAGCTTCTCTTTCAACTGAGCTGGAGAAAGTTCGGGATGAGAGATCAGCTGCTGAGCGGAAGGCCATTTCAAATGAGGACTTGTACAAGCGATCACAGGAGTACAATATGAGTCTGCAGCAGTACAATAGTCGCCTTCAATCAGATCTTGAAACAACTAATGAAGCACATAAACGACTGGAAACCGAGAAAGCAACCATTGTTGAGAACCTTAGCAATGTTAGAGGCCACAATAAGGCATTGCAGGATCAGTTGGCATCTCTTAAAACCTCACAGGATGAGGCTACTAAGCAGAAGGAAATGTTAGCAAATGAGCTCAAATGCCTTCGGGAAGAACTAAAACAAATTAGAGATGATCGTGATCGCCAACTGGGACAAGTACAGTCTTTGACTGGAGAAGTAGAAAAATACAAAGAATATACAGGGAAATCATGTGCACAATTGGATACGTTGACAATAAAAACAAATGCTCTAGAGGAGACATGTTCTTCCCAAAGGGAGCAAATAAATATACTGCAGCATCAGTTGAATGCTGAAAGGGAGAAGTTAAAGATGGCTGATTTATCTGCTTCAAAATCAAGAACAGTGTTTGAAGATCAGGAAAGAATTATAAGTGAACTACAGGAACGACTAGCAGAGAAAGAATTCCAAGTAATTGAAGGAGAGAAATTAAGGAAAAAATTGCACAACACTATCCTGGAGCTAAAAGGAAATATTCGCGTGTTCTGCCGTGTTCGACCTTTGCTACCGGATGATGGTCCTGGAACAGACATGGTTGTTTCTTACCCTTCGTCAACAGAAGCCCTTGGCCGGGGCATTGAATTGGTACAGAGCGGGCAGAAGTACCCTTTTACATTTGACAAGGTATTTAATCACGAGGCTTCTCAGCAAGATGTTTTCATTGAGATATCACAGCTGGTACAAAGTGCCCTTGATGGGTACAAGGTCTGTATCTTTGCTTATGGACAGACAGGTTCAGGCAAAACCTATACAATGATGGGTAGGCCTGATGCCCCAGAGCTGAAGGGGTTGATACCGCGTTCTCTAGAACAGATATTCCAGATTAGTCAGTCCCTGAAGGATCAGGGATGGAAGTACAAAATGCAGGCTTCAATACTGGAAATATATAATGAGACCATCAGGGATTTGTTATCATCAAATCGGTCAAGTAGTATTGACCCAACACGAACAGAAAATGGTGTACCTGTTTCTGGAAAGCAGCAGCAATACACTATCAAACACGATGCCAATGGAAACACACATGTTTCAGACCTCACTATTGTGGATGTTTGTAGTGCAAATGAGATTTCCTCCCTTCTGCAACAGGCAGCACAAAGCAGGTCTGTAGGAAGAACACAGATGAATGAACAATCATCACGAAGTCATTTTGTGTTTACTTTGCGTATATGTGGGATTAACGAGAACACTGAACAACAAGTGCAAGGTGTGTTAAACCTGATTGATCTGGCTGGAAGTGAAAGACTCTCGAGGAGTGGGGCAACTGGGGACCGGTTAAAGGAAACTCAGGCTATCAACAAAAGTCTCTCATCTTTGAGTGATGTCATATTTGCTTTGGCAAAGAAAGAGGAGCATGTCCCCTTTAGGAATTCAAAATTGACTTACCTTCTCCAGCCATGTCTTGGTGGGGATTCCAAAACTTTGATGTTTGTGAACATATCACCTGATCCATCTTCAACTGGAGAGTCACTCTGCTCTCTTCGTTTTGCCGCTAGAGTCAATGCCTGCGAAATTGGTATTCCGCGGCGTCAGACATCAACGCGGTCCTTTGACTCTCGTTTGAGCTATGGCTAA 2403 0.432 MASRNQNRPPRSPSNKKGGAEELPSDKRRRIGAEKMERQGRTRAPFGALSNKAEANEVAGAEGSDFATVEFTKEDVEALLNEKMKKGNPFDNKKKMDQMADLIKRLKLCVRWFKRIEEGYIQEKEKLQTELESALKKCIDTGNEMKVKIAELNETISNLRTTISSLEERIAKEESAKLEAIDCYRREKEARSTAEQMQASLSTELEKVRDERSAAERKAISNEDLYKRSQEYNMSLQQYNSRLQSDLETTNEAHKRLETEKATIVENLSNVRGHNKALQDQLASLKTSQDEATKQKEMLANELKCLREELKQIRDDRDRQLGQVQSLTGEVEKYKEYTGKSCAQLDTLTIKTNALEETCSSQREQINILQHQLNAEREKLKMADLSASKSRTVFEDQERIISELQERLAEKEFQVIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDGPGTDMVVSYPSSTEALGRGIELVQSGQKYPFTFDKVFNHEASQQDVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPELKGLIPRSLEQIFQISQSLKDQGWKYKMQASILEIYNETIRDLLSSNRSSSIDPTRTENGVPVSGKQQQYTIKHDANGNTHVSDLTIVDVCSANEISSLLQQAAQSRSVGRTQMNEQSSRSHFVFTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNACEIGIPRRQTSTRSFDSRLSYG* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1311 800 ProSitePatterns Kinesin motor domain signature. 679 690 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr1g1311 800 ProSiteProfiles Kinesin motor domain profile. 435 779 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g1311 800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 777 IPR027417 -
Apr1g1311 800 Coils Coil 149 176 - -
Apr1g1311 800 MobiDBLite consensus disorder prediction 20 41 - -
Apr1g1311 800 Coils Coil 359 379 - -
Apr1g1311 800 Coils Coil 275 323 - -
Apr1g1311 800 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g1311 800 PRINTS Kinesin heavy chain signature 649 666 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g1311 800 PRINTS Kinesin heavy chain signature 680 698 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g1311 800 PRINTS Kinesin heavy chain signature 729 750 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g1311 800 SMART kinesin_4 433 787 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g1311 800 Coils Coil 394 414 - -
Apr1g1311 800 Pfam Kinesin motor domain 441 777 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g1311 800 PANTHER KINESIN-LIKE PROTEIN 3 800 - -
Apr1g1311 800 MobiDBLite consensus disorder prediction 1 51 - -
Apr1g1311 800 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 800 - -
Apr1g1311 800 Coils Coil 191 218 - -
Apr1g1311 800 CDD KISc_C_terminal 433 781 - -
Apr1g1311 800 Coils Coil 240 267 - -
Apr1g1311 800 Coils Coil 117 137 - -
Apr1g1311 800 Gene3D Kinesin motor domain 379 781 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1311 Apr-Chr1 22026766 22032556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1311 344 791 Calmodulin-binding Proteins AT5G65930 36.026 4.58e-79 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1311 K10405 - gmx:100808278 1337.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1915 3 35194087 35200408 Apr1g1311 1 22026766 22032556 PCT