Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1304 ATGGCGGGTTATGGTGCTAAAAGTCACATTCATTGCTTGCAAACCATCAAGAATTTGGACCCGTTTAATCATTTATCAAGCTGGGATTTCGAGAGCAACAATGAAGGTGACATATGTAGATTTAGTGGGGTTGAATGCTTGAATTATATGGAAGATAGAGTAATAAATATCTGGCTTTCTAATATGGGGCTGAAGGGCATGTTCCCCAGTTGCATTGAACATTTCACATGGTTGCAGAGTCTGGACCTCTCATACAACGAGCTTTATGGAAATATCCCATCTGATATATCAAGTAATTTGCCATATCTGACCTCACTTGATCTCTCAAAAAACAATTTTTATGGTGAAATTCCAAAGGGTATTGCCAACTTCTCTTACTTAGATACCCTTAGACTTGATGGCAACCAGTTAACTGGCCAAATCCCAAAAGAACTTGGGTTGCTTCCTCGGATTAGAGATTTTAGTGTCGCTAACAATTTGTTAACAGGGCCAGTGCCTGATTTTGTCAGCAATGTAGATGTGAGTTTGAGCTATGCCAATAATAGTGGACTCTGTGGGGGAATACTAGAAAGCTGTGACCAGAGCTTATTTGATAGATCATTTTGGTATAGTTTCATTATTGGTTTTGTTTCTTCAGCAGCAGCTATCATGTACCATTATGCACCTTGGACAGAATTCAAAAAGAGGAGGAGTAACGCCGTATATCCCTTAAGAAAAAAGCAGAACTATCAAAAGGAGACTGGACAAGCAGTTGAATTGCTGCCACTGGCCTTGCAAGAGCAAGGAAGCCAAGAGCTGTCAAGATTGTTAGAGAGATTGATTCCTAGGATGAGCTTCATGGAACTATGCAGGGCAACTGAATATTTTACTGCAGACAACATATTGGGGCTGGGAACAACAGGGATTATGTACAAGGCCAAGGTACCAAATAACTGTTTCTTGGCAGTTAAGAGACTATATGATGCTGATATGTACAAGAGGGAATTCTTACTTGAAACAATGATTCCGGGGAGACACAAGCCCATAAACATAGCTCCTTTGTATGGATTCTTCATGGAGAAAAACGAAAGGATTTTGGTGTATAAGTACATGGCTAATGGAAAACTTAGTAACTGGTTACATTCTGATGAAGGACAACCAACAATAAAATTGGAATGGCCAGAGAGAATTCACATTGCACTTGGGCTTGCAAGGGGTTTATCTTGGCTCCACAAAAGGTGCAAGATAGTCCATCTCAATCTAGATTCGGAGTGTGTCTTGCTGGACAAGAATTTTGAGCCAAAAATTTCCAATTTTGGCAAGGCAAAATTCATAAACCAGTTGGTTGAAGATCATGAAAGGATGAAATTGTTTTTGATTGATGGAATTGGGGTGAAGGGTTCTGTGGAGAGGGATGTCTATGACTTTGGAATAATCCTTTTTGAGCTTATAACTGGGAAAAGATTAAGTCCAACGACTGATACTTGTGGCAATGCTAATGACTCTCTGATGAAATATATTAGTAATAACTTGTTCGCTGATCCTATTGATTTTTTTGATGCCGTTGACAAATCTATCATTGGGAAAGGTTTTGATAATAAAATCCTCGATCTCCTCGAAGTTGCATGTGACTGTGTTAAGGATTCTATAGAGCAACGGCCAATGATGGTTGATATGTACAAAACTATTAGAGCCATGTGGGAGAGTTATAAACCCTGGTTTGATTCTGAAAGGCTGAAGCTATCTATGAGGTGTTCAGATCAGATAACTTGTAGCAACGAAATGGAATGTATTTGTTGA 1779 0.3924 MAGYGAKSHIHCLQTIKNLDPFNHLSSWDFESNNEGDICRFSGVECLNYMEDRVINIWLSNMGLKGMFPSCIEHFTWLQSLDLSYNELYGNIPSDISSNLPYLTSLDLSKNNFYGEIPKGIANFSYLDTLRLDGNQLTGQIPKELGLLPRIRDFSVANNLLTGPVPDFVSNVDVSLSYANNSGLCGGILESCDQSLFDRSFWYSFIIGFVSSAAAIMYHYAPWTEFKKRRSNAVYPLRKKQNYQKETGQAVELLPLALQEQGSQELSRLLERLIPRMSFMELCRATEYFTADNILGLGTTGIMYKAKVPNNCFLAVKRLYDADMYKREFLLETMIPGRHKPINIAPLYGFFMEKNERILVYKYMANGKLSNWLHSDEGQPTIKLEWPERIHIALGLARGLSWLHKRCKIVHLNLDSECVLLDKNFEPKISNFGKAKFINQLVEDHERMKLFLIDGIGVKGSVERDVYDFGIILFELITGKRLSPTTDTCGNANDSLMKYISNNLFADPIDFFDAVDKSIIGKGFDNKILDLLEVACDCVKDSIEQRPMMVDMYKTIRAMWESYKPWFDSERLKLSMRCSDQITCSNEMECIC* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1304 592 SUPERFAMILY L domain-like 35 196 - -
Apr1g1304 592 ProSiteProfiles Protein kinase domain profile. 289 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1304 592 Pfam Leucine rich repeat N-terminal domain 11 46 IPR013210 -
Apr1g1304 592 Pfam Protein kinase domain 290 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1304 592 Gene3D Transferase(Phosphotransferase) domain 1 364 575 - -
Apr1g1304 592 SUPERFAMILY Protein kinase-like (PK-like) 265 564 IPR011009 -
Apr1g1304 592 Gene3D Phosphorylase Kinase; domain 1 254 363 - -
Apr1g1304 592 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 5 560 - -
Apr1g1304 592 Gene3D Ribonuclease Inhibitor 10 193 IPR032675 -
Apr1g1304 592 PANTHER RECEPTOR-LIKE PROTEIN 55 5 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1304 Apr-Chr1 21976395 21978313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1304 10 561 Receptor kinase-like Gene Family AT3G28450 34.446 6.79e-96 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Apr1g1304 Pkinase 7.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1304 - - gmx:106795644 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1918 3 35220659 35222548 Apr1g1304 1 21976395 21978313 PCT