Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1247 ATGGGAGTGCAGAAGCAATTGATAAGGCCTGGCACCGGTGCAAAGCCTCTTCCCGGTCAGAATGTCACTGTTCACTGCACTGGTTTTGGAAAGAACGGTGACCTTTCTCAGAAGTTTTGGAGCACCAAGGATCCTGGCCAGAACCCTTTCACATTCAAAATCGGCCAAGGTTCTGTTATCAAAGGATGGGACGAAGGTGTGATTGGCATGCAAGTCGGTGAAGTTGCTCGTCTCAGGTGCTCTCCTGATTATGCTTATGGTGCTGGTGGCTTTCCTGCTTGGGGAATACAGCCCAACTCTGTCTTGGAATTTGAAATCGAAGTCTTGAACGTGCAATAA 339 0.4867 MGVQKQLIRPGTGAKPLPGQNVTVHCTGFGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVIKGWDEGVIGMQVGEVARLRCSPDYAYGAGGFPAWGIQPNSVLEFEIEVLNVQ* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1247 112 Gene3D - 1 112 IPR046357 GO:0003755
Apr1g1247 112 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 112 IPR001179 GO:0003755
Apr1g1247 112 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 16 109 IPR001179 GO:0003755
Apr1g1247 112 PANTHER PEPTIDYLPROLYL ISOMERASE 1 111 - -
Apr1g1247 112 SUPERFAMILY FKBP-like 2 111 - -
Apr1g1247 112 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1247 Apr-Chr1 21208826 21211595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1247 3 110 Calmodulin-binding Proteins AT5G48570 32.432 1.28e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1247 K01802 - gmx:100500283 225.713