Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1246 ATGGTTAAGGCTCATAGGTCTTGGGCTTACCCACAGCACGTGGCTTGGCCATCACCTTATTTAAGTTGCTCCTGCCCATTGGTGGAGCCTGGTTCATGTGGTCATTCAGCACATCTGAACCCTAGCACATGCATCCTTCCTGCTGTCAGTGTATTTCAAGGATTCACAGCTCCTGCTATCCCAATCTTGAAGACTGAGCAGACCAATGAAGTGCAAGGATTCCTTCAGTATCCCAATTCAGAACCATGTTTGAAAGGAACACATACTGGAGGGGCTATGCAAAATGCAAATCATGCATCTTTGCAGAAGAATTTACTTATTTTTGACCACTCTGGTAATAAGACAAGGTTGCTTTATAGTCCTGTCTTTCCTCTTGTTCAGAGTCCAATTGTAACTGCTGCACAATTTGCTCAAGCTTATAATGTAAATGAGGAAGCACGGGAAACTAATAAGGGCCAAAAGCAATTACCCATGTACACTTCACCAGAGGAGTCTGATAAGGATCATATCGTTAATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCGTTGCTTTATTCTGATGATTCTGATTCTGGTTCTGATAATGATGATGATGAGGTAACAAGTACAGGCCATTCTCCATTGGTTACTAAAAGAACTTATGTAATGCAAGAACAGTTTGAGGATAAAGAGGGAGAGGTTGTTAGCTCTGACTGGTCAAACAAAAGGCGGAAGTTAATTGATGGTGGATACAATAGATTACCATCACTTGTGGACAGTGCTGGTTCCGTCAGGCTAAATGAAATGTGTGAGTATATCAGTGATGCTGAATCAAAGTATTCTTGTGGCAGCCAAACTAAACGAAATAATTTAACAGCGGCTGATATTCAATTGAAAAAGGATAAAATCCGTGAATCTTTGAGAGTTCTTGAGAACTTAATTCCTGGAGCAAAAGGAAAGCATCCCCTGTCAGTCATTGATGGGACTATTGAGTACTTGAAATCTTGGATTTCCCAAACCGGTACACTGTGA 1023 0.4096 MVKAHRSWAYPQHVAWPSPYLSCSCPLVEPGSCGHSAHLNPSTCILPAVSVFQGFTAPAIPILKTEQTNEVQGFLQYPNSEPCLKGTHTGGAMQNANHASLQKNLLIFDHSGNKTRLLYSPVFPLVQSPIVTAAQFAQAYNVNEEARETNKGQKQLPMYTSPEESDKDHIVNEESEMHEDTEEINALLYSDDSDSGSDNDDDEVTSTGHSPLVTKRTYVMQEQFEDKEGEVVSSDWSNKRRKLIDGGYNRLPSLVDSAGSVRLNEMCEYISDAESKYSCGSQTKRNNLTAADIQLKKDKIRESLRVLENLIPGAKGKHPLSVIDGTIEYLKSWISQTGTL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1246 340 PANTHER TRANSCRIPTION FACTOR SAC51 8 339 - -
Apr1g1246 340 MobiDBLite consensus disorder prediction 145 167 - -
Apr1g1246 340 Coils Coil 290 310 - -
Apr1g1246 340 MobiDBLite consensus disorder prediction 189 214 - -
Apr1g1246 340 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Apr1g1246 340 PANTHER TRANSCRIPTION FACTOR BHLH145 8 339 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1246 Apr-Chr1 21202175 21206211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1246 83 331 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 38.340 1.35e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1246 - - gmx:100778385 514.612