Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1216 ATGGATAGTCTCTGTTGCTTCAGCTCTGTCAATCAGGTGGTTGGAGGAGGACGTTCATCTTACTCTGGCAAGGGCAAGAGCAATCAAAGCTCAGTTAAGTATGGCTTTAGCCTGGTTAAAGGGAAAGCAGACCACCCAATGGAGGACTATCACGTAGCAAAAATTGTCCAGTTTAGAGACCATGAGTTAGGACTTTTTGCTATATATGATGGACACTTGGGAGACAGTGTGCCGGCCTATCTTCAAAAGCATCTCTTTTCTAATATCTTGAAGGAAGAGGACTTCTGGACTGATCCAAATAGTTCCATCATTAGAGCTTATGAGACAACAGATCAGGCTATCCTTTCTCACAGTTCTGATTTGGGGCGAGGAGGGTCCACTGCAGTGACTGCAATTCTTATTAACAATCGGAAGTTATGGGTAGCAAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGAGAGGGGTGGCCATACAGATGACTACTGATCATGAGCCCAATACCGAAAGGGGCATCATCGAGAACAAAGGCGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCAGTTTCTCGAGCATTCGGAGACAAAAACCTTAAATCACACTTACGATCGGATCCCGACGTACAACATAATGACATTCAACAAGATACTGAGCTTCTGATACTTGCCAGTGATGGTCTATGGAAGGTAATGGCAAACCAAGAGGCAGTTGATATTGCAAGAAGGATAAAAGATCCACAAAAGGCAGCAAAAGAACTAGCTGCGGAGGCATTGAAGAGAGAGAGTAAAGATGATATTTCATGCATTGTAGTTCGTTTCTAG 843 0.4425 MDSLCCFSSVNQVVGGGRSSYSGKGKSNQSSVKYGFSLVKGKADHPMEDYHVAKIVQFRDHELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWTDPNSSIIRAYETTDQAILSHSSDLGRGGSTAVTAILINNRKLWVANVGDSRAVLSRRGVAIQMTTDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVQHNDIQQDTELLILASDGLWKVMANQEAVDIARRIKDPQKAAKELAAEALKRESKDDISCIVVRF* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1216 280 SMART PP2C_SIG_2 44 280 IPR001932 -
Apr1g1216 280 SUPERFAMILY PP2C-like 29 280 IPR036457 -
Apr1g1216 280 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Apr1g1216 280 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 280 - -
Apr1g1216 280 Gene3D - 19 280 IPR036457 -
Apr1g1216 280 SMART PP2C_4 29 278 IPR001932 -
Apr1g1216 280 CDD PP2Cc 32 280 IPR001932 -
Apr1g1216 280 PANTHER PROTEIN PHOSPHATASE 2C 1 280 IPR015655 GO:0004722|GO:0006470
Apr1g1216 280 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1216 Apr-Chr1 20788206 20792093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1216 1 280 PP2C-type Phosphatase Gene Family AT1G22280 72.028 1.28e-151 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1216 K17506 - gmx:100801722 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1995 3 35987706 35995289 Apr1g1216 1 20788206 20792093 PCT