Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1214 ATGTCTTCTTCGATTTCAATTCCGATTCGAATTCCAATTGCAATTGCAATGGATTCAGCGTTGGCTGCGACTGTCACGCAGATGGCGTTTTTCAAACCACTGAACCACCGCCATTTGGCCACACGCAGATGGCGCTTTTCCAATCTCCACCGCCTCCACTGTGTTATGCCTGTGCGGTGTTCCTCCGTCGGCGGCAACAGTGTTGACGACGATGGAATGATGTGCGACGGATGTGCAGATAACGTCAGAAGAACTTTAGAAAGCCGACCACAAGTGTCATCTGCCAAAGTAAATCTAAGATCCGAGACAGCAATAGTTTCGGCTGTGCCTGAAGAAAAAACTGCACCAAATTGGCAACAGCAATTAGGGGAGACACTTGCACAGCATTTAACTACCTGTGGCTTCACTTCTACCATTCCAGGTGGGACAAATCAAGAAGATCGCTGA 447 0.4832 MSSSISIPIRIPIAIAMDSALAATVTQMAFFKPLNHRHLATRRWRFSNLHRLHCVMPVRCSSVGGNSVDDDGMMCDGCADNVRRTLESRPQVSSAKVNLRSETAIVSAVPEEKTAPNWQQQLGETLAQHLTTCGFTSTIPGGTNQEDR* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1214 148 Gene3D - 68 140 - -
Apr1g1214 148 PANTHER ATP7, ISOFORM B 68 138 - -
Apr1g1214 148 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 68 138 - -
Apr1g1214 148 SUPERFAMILY HMA, heavy metal-associated domain 71 116 IPR036163 GO:0046872
Apr1g1214 148 Pfam Heavy-metal-associated domain 71 124 IPR006121 GO:0046872
Apr1g1214 148 CDD HMA 71 112 IPR006121 GO:0046872
Apr1g1214 148 ProSiteProfiles Heavy-metal-associated domain profile. 65 139 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1214 Apr-Chr1 20765326 20767222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1214 68 138 Primary Pumps ATPases AT4G33520 61.972 1.91e-26 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1214 - K17686 ccaj:109805170 147.902