Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1209 ATGGGGTTTCCCCTCTTTGCTCTTCAGCACATTACTTTCTTGGTCCTTGCTATTCTGACCACACTTGCTGTAGCTCAGGGAGACCCTATAAGCAAAACCAGCTCAGATTCTTCTATCCTACTACCCTTAAATGGCACTGACAACGATGAAGTCCAAAATAAACCTTCAGATAAAAAGAACGGTTCCAATAATATTTCATTAATTTTCAATGTGGTTCTTCTGCTTGCAATTATATTACTGTTGATACTTTACTTCAACACAGCCAGAAAGCTAAATAAAATTGGGAAGGGGCAGGTTCCAACGGTCCTAGAAAAAGACAATGATGTGGAGATCAGCGTTGACAAGAAGATAGAGATAGGAGAGGGGACAATAATGATGACAGTAGAAGAGAGAAAGGAACTCATATTCTTTAATGATAAACCAAAATTTAAAATGGCAGAACTTCTTAGAGCTTCTGCTGAGTCACTGGGTCATGGAATCATGGGGAATAGTTATAAGGCCATGCTGAATGATGGATCAACTATTGTTGTAAAACGGCTAAGGGACCTGAAGCCTCTCACTAAGGAGGAATTTGCAAAGATATTGCATCTGATTGCTGATCTGAAGCACCCCAATTTGTTACCTTTGCTTGCTTACTACCATTCCAAAGATGAGAAACTGATGCTCTATAAATATGCAGAGAATGGAAATCTTTTCTCCCGACTTCATGATGGTAGAGGTGGAAACCGGCTTCCATTCAGTTGGAGCTCAAGGTTATCAGTGGCACGAGGCGTGGCTCGAGCATTGGAGTACCTGCACCTAAACAACAGGTTCCAAAACATTGTCCCACATGGGAACTTGAAGTCTTCAAATGTACTATTCGATGAAAACGATGCAGTTGTTGTATCTGACTTTAGTCTTGCTTCATTAATAGCACAACCAATTGCAGCTCAGCATATGGTTGTTTACAAGTCACCTGAATATGGGTATGCAAGAAAGGTGACAATTCAATCCGATATATGGAGCTATGGATCCCTTCTAATTGAACTTGTAACTGGAAAAGTATCAGTGTGCTCAGCTCCATCAGGGACCAATGGCGTGGATCTCTGCAGTTGGGTTCACAGAGCTGTGAGAGAAGAATGGACAGCTGAGATCTTTGATAAAGAAATTTCTGGCCAAAAGAGTGCTCTTCCCGGGATGCTAAGGTTGCTGCAGATAGCAATGCGTTGCATTGAGAGGTTCCCAGAAAATCGTCCTGAGATGAGAGAGGTGGTGAGAGAAGTGGAGAAAATACATGCCCCAATGATCTCTGAAGATGAAGATGATGTATCTGGGGATAGGTCTCTAACAGATGATTCCCTTTCAACCAGTACTTCCTTTGTTGCAGATGAAAGATAG 1377 0.4183 MGFPLFALQHITFLVLAILTTLAVAQGDPISKTSSDSSILLPLNGTDNDEVQNKPSDKKNGSNNISLIFNVVLLLAIILLLILYFNTARKLNKIGKGQVPTVLEKDNDVEISVDKKIEIGEGTIMMTVEERKELIFFNDKPKFKMAELLRASAESLGHGIMGNSYKAMLNDGSTIVVKRLRDLKPLTKEEFAKILHLIADLKHPNLLPLLAYYHSKDEKLMLYKYAENGNLFSRLHDGRGGNRLPFSWSSRLSVARGVARALEYLHLNNRFQNIVPHGNLKSSNVLFDENDAVVVSDFSLASLIAQPIAAQHMVVYKSPEYGYARKVTIQSDIWSYGSLLIELVTGKVSVCSAPSGTNGVDLCSWVHRAVREEWTAEIFDKEISGQKSALPGMLRLLQIAMRCIERFPENRPEMREVVREVEKIHAPMISEDEDDVSGDRSLTDDSLSTSTSFVADER* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1209 458 MobiDBLite consensus disorder prediction 442 458 - -
Apr1g1209 458 PANTHER OS05G0588300 PROTEIN 46 454 - -
Apr1g1209 458 ProSiteProfiles Protein kinase domain profile. 150 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1209 458 Gene3D Transferase(Phosphotransferase) domain 1 226 444 - -
Apr1g1209 458 SMART serkin_6 150 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1209 458 MobiDBLite consensus disorder prediction 428 458 - -
Apr1g1209 458 Pfam Protein tyrosine and serine/threonine kinase 154 420 IPR001245 GO:0004672|GO:0006468
Apr1g1209 458 PANTHER RECEPTOR-LIKE KINASE 46 454 - -
Apr1g1209 458 SUPERFAMILY Protein kinase-like (PK-like) 154 425 IPR011009 -
Apr1g1209 458 Gene3D Phosphorylase Kinase; domain 1 119 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1209 Apr-Chr1 20702356 20704565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1209 115 450 Receptor kinase-like Gene Family AT2G36570 39.155 1.08e-75 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr1g1209 PK_Tyr_Ser-Thr 6.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1209 - - mtr:MTR_2g008740 632.098