Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1208 ATGGAGGGTGATTTATCTTACAAAAACTTCCTTCTAGAGTTTCTTCTGCTTTCTCTGGCTGTTGTAAGCACAGTGGGGCACGGCCAAGGCACACGTGTAGGGTTCTATTGGAGTTCATGTCCTCGTGCTGAGTCCATTGTTAGGTCCACCGTTGAATCCTACGTCAGGTCTAACCCTACTTTTGCTGCTGGGCTACTTAGGATGCACTTCCATGATTGCTTCATTAGAGGTTGTGACGCTTCTGTCCTCATTGCTGGCTCTGATACCGAGAGATCAGCGGGGCCAAACCGTAATTTGAGAGGCTTCCAAGTAATTGATGATGCAAAGGCAAAGCTCGAGGCTGCGTGCCCTGGTGTTGTGTCCTGTGCTGATATTCTTGCCCTTGCTGCTCGTGATTCCGTTGTTCTGAGTGGTGGAAAGAGTTGGGAAGTGCCCACTGGACGCAAAGATGGAAGGATTTCAATTGGAACAGAAACGAATACTTTGCCTGCTCCTAATGATAGCATTGCAGTGCAGAAGCAAAAGTTTTCTGATAAGGGTCTTAACACCCAGGATCTCGTCCTTCTTGTTGGTGGGCATACGATAGGTACCACTGCATGCCAATTCTTCGCAGACAGAATATACAACTCAAATGGCACTGATCCTTCAATTGATCCTTCTTTTCTTCCATTTTTGCGACAAATTTGCCCACAAAACCAACCAACGAAGCGAGTTGCACTCGACACCGCAAGCCAATTCAAATTCGACACATCTTACTTCGCTAACCTTAAGAGAGGTCGTGGAATTCTCCGTTCTGATGAAGTGCTTTGGACCGATGCTTCTACGAGAAACTTTGTTCTGAAATTCTTAGCCACGGGTCCCTTCAACATCGAATTTGGCAAGTCTATGGTGAAGATGGGCAACATTGCTGTGAAGACAGGTGCTGATGGAGAAATTCGCAAGAAATGTTCTGCTGTTAATTAG 963 0.4631 MEGDLSYKNFLLEFLLLSLAVVSTVGHGQGTRVGFYWSSCPRAESIVRSTVESYVRSNPTFAAGLLRMHFHDCFIRGCDASVLIAGSDTERSAGPNRNLRGFQVIDDAKAKLEAACPGVVSCADILALAARDSVVLSGGKSWEVPTGRKDGRISIGTETNTLPAPNDSIAVQKQKFSDKGLNTQDLVLLVGGHTIGTTACQFFADRIYNSNGTDPSIDPSFLPFLRQICPQNQPTKRVALDTASQFKFDTSYFANLKRGRGILRSDEVLWTDASTRNFVLKFLATGPFNIEFGKSMVKMGNIAVKTGADGEIRKKCSAVN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1208 320 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Apr1g1208 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Apr1g1208 320 CDD secretory_peroxidase 32 319 IPR033905 GO:0004601|GO:0042744
Apr1g1208 320 ProSiteProfiles Plant heme peroxidase family profile. 30 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PANTHER PEROXIDASE 9 318 - -
Apr1g1208 320 PANTHER PEROXIDASE 25-RELATED 9 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 Gene3D - 34 320 - -
Apr1g1208 320 Pfam Peroxidase 47 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1208 320 Gene3D Peroxidase, domain 2 163 299 - -
Apr1g1208 320 SUPERFAMILY Heme-dependent peroxidases 32 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1208 Apr-Chr1 20696159 20698211 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1208 8 320 Peroxidase AT5G64120 57.669 4.54e-137 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1208 K00430 - gmx:100789249 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1208 1 20696159 20698211 Apr1g1208 1 20696159 20698211 ECH