Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1206 ATGGAGGCACGTCGTTTATGCATGCTAGTGTTTGTGTTGTTTGCTTTGGCATTTGAAAACGTTGTGCATGGCCAAGGGACGCGTGTAGGATTCTATTCCACTACGTGTCCTCGAGCTGAGTCCATTGTTAGGTCCACAGTTCAATCCCACGTTAAGTCTGATCCTACTTTGGCTCCTGGGTTGCTTAGGATGCACTTCCATGACTGCTTTGTGCAAGGCTGTGACGGTTCTGTGCTCATTTCTGGTGATGGCACTGAAAGAACAGCACTTGCAAACCTTGGCTTAAGAGGCTATGAGGTTATTGATGATGCGAAGACAAAGCTCGAGGCAGCGTGCCCTGGTGTTGTGTCTTGTGCTGACATTGTTGCCCTTGCTGCTCGTGATTCCGTTGTTTTGAGTGGAGGACTGAGTTGGCAAGTGCCAACTGGTCGTAGAGATGGCCGCGTGTCACAGGCTTCAGATGTGAATAACTTGCCTGCCCCTTTTGACTCTGTTGATGTCCAAGAACAAAAGTTCGCAGACAAGGGCCTTAACACTCAAGACCTTGTCACTCTTGTTGGTGCACATACCATTGGTACAACAGCATGCCAATTCTTCAGTAACAGATTGTACAACTTCACTGCAAATGGTCCCGACTCTTCCGTGGACCCTTCATTTCTTCCCCAACTAAGAGCACTTTGCCCGCAAAACAGTGGCGCTACGAACCGAGTTGCACTAGATACCGGTAGTCAAAGCAAATTTGATACATCTTACTTTACTAATTTGAAGAATGGTCGTGGAATTCTGCAGTCTGATCAAGCGCTTTGGAGTGATGCTTCTACTAAGACCTTTGTACAAAGGTACTTGGGCTTAAGAGGCTTGCTTGGATTAACATTCAACGTGGAATTTGGAAAGTCTATGGTGAAGATGAGCAACATTGGTGTTAAGACGGGTGCTGATGGTGAAATTCGCAAGATATGTTCCGCTGTTAACTAA 975 0.4656 MEARRLCMLVFVLFALAFENVVHGQGTRVGFYSTTCPRAESIVRSTVQSHVKSDPTLAPGLLRMHFHDCFVQGCDGSVLISGDGTERTALANLGLRGYEVIDDAKTKLEAACPGVVSCADIVALAARDSVVLSGGLSWQVPTGRRDGRVSQASDVNNLPAPFDSVDVQEQKFADKGLNTQDLVTLVGAHTIGTTACQFFSNRLYNFTANGPDSSVDPSFLPQLRALCPQNSGATNRVALDTGSQSKFDTSYFTNLKNGRGILQSDQALWSDASTKTFVQRYLGLRGLLGLTFNVEFGKSMVKMSNIGVKTGADGEIRKICSAVN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1206 324 PANTHER PEROXIDASE 25-RELATED 8 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 Gene3D - 30 324 - -
Apr1g1206 324 CDD secretory_peroxidase 28 323 IPR033905 GO:0004601|GO:0042744
Apr1g1206 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Apr1g1206 324 SUPERFAMILY Heme-dependent peroxidases 28 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 Gene3D Peroxidase, domain 2 159 303 - -
Apr1g1206 324 Pfam Peroxidase 43 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1206 324 PANTHER PEROXIDASE 8 322 - -
Apr1g1206 324 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1206 Apr-Chr1 20685100 20687030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1206 5 324 Peroxidase AT2G41480 63.975 1.56e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1206 K00430 - gmx:100783523 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1206 1 20685100 20687030 Apr1g1206 1 20685100 20687030 ECH