LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr1g1199	ATGAGTCAGCGTGTGAGTGACGAGGTTGTGGCAAAGGCCATGGGGGAAACAAGAAGTGGGCCTTCTTCACGTAGACATGGAGATACTTTGCCACATATTCACAAGGTGGGAGCACCTCCTAAGCAGACACTTTTCCAAGAGATAAAACATTCTGTCATAGAGACTTTCTTCTCAGACAACCCCTTTGAAAAATTTAAGGATCAAACCAAGTCTAGAAAGTTTGTTCTAGGCCTTCAATCTGTCTTTCCCATTTTTGACTGGGGGAGAGGTTATGATCTTAAGAAATTCAGAGGTGATTTGGTTGCTGGACTCACCATTGCAAGTCTTTGTATACCTCAGGACATTGCATACGCAAAGCTTGCAAATTTGGACCCCCAATATGCACTATATAGCAGTTTTGTGACTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCCATAGGACCCGTAGCTGTGGTGTCCCTCTTGCTTGGATCTTTGCTTTCAGATGAGATTAGTGACACCACAAGTCATGATTACCTGCGTCTAGCCTTTACTGCCACCTTCTTTGCTGGAATCACTCAAATGACACTTGGAGTTTTCAGGCTTGGTTTCTTAATTGACTTCCTTTCTCATGCTGCCATTGTGGGATTCATGGGTGGAGCTGCCATTACTATTGCATTACAACAGCTTAAAGGTTTTCTTGGCATAAAAAATTTCACTAAGAAAACGGATATTGTCTCTGTCATGCGCTCAGTTTGGAGTACAGTGCACCATGGGTGGAATTGGGAGACAATTGTCATTGGAACAGCATTCTTGGTCTTCCTTCTTACAACTAAGTATATTGCTAAAAAGAACAAGAAACTCTTTTGGGTGGCCGCAATTTCTCCAATGATTTCTCTTATAGTGTCTACCTTTTTTGTCTACATTACCAGGGCTGACAAAAGAGGAGTATCGATTGTGAAACATATTAAGAAGGGTTTGAATCCATCATCTGCTAGTGAGATTTTTTTCAATGGAAAATATCTGGGTGCTGGTGTTAGGATTGGTGTGATATCTGGTATGATAGCACTCACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATTCACTGGATGGTAACAAAGAAATGGTAGCAATGGGAACAATGAACGTTATTGGTTCACTTACATCTTGTTATGTGACTACAGGATCTTTTTCTCGTTCAGCAGTGAATTACATGGCTGGTTGTAAAACTGCTGTATCAAACATCATAATGTCCATAGTTTTGTTACTAACATTGATACTCATTACACCACTGTTTAAGTACACTCCAAATGCGGTGCTTGCTTCAATTATAATAGCTGCTGTGATTAACCTCGTGAACATTGAAGCAGTTATTCTGCTGTGGAAGATAGACAAATTTGATTTTGTGGCTTGCATGGGAGCCTTCTTTGGTGTGGTCTTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTGGCTATATCTTTTGCCAAAATCCTTTTGCAAGTGACAAGGCCAAGGACTGCAGTACTAGGGAAACTTCCAGGAACTACTATTTACAGGAACATCCAGCAATACCCCAAAGCGACCCAGATTACTGGGATGCTGATTATAAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATAAAGGAGAGAATTTTAAGATGGCTGACTGACGAAGAAGCCCAAAGGACCAGTAGTGGATTGCCCAGTATACAGTATCTCATTATTGAAATGTCACCTGTTACCGATATTGACACTAGTGGCATCCACGCCTTTGAAGAATTATACAAGAACCTTCAGAAAAGAGAAGTCCAGATTATCTTGGCAAACCCGGGGCCCATTGTAATGGAGAAGCTCCACGCATCCAAGTTAACAGACATAATTGGTCAAGATAAAATATTTCTAACAGTGGCTGATGCTGTTTCAATTTTTGGTCCAAAGGGTGAAGAAGTAGTATGA	1977	0.4117	MSQRVSDEVVAKAMGETRSGPSSRRHGDTLPHIHKVGAPPKQTLFQEIKHSVIETFFSDNPFEKFKDQTKSRKFVLGLQSVFPIFDWGRGYDLKKFRGDLVAGLTIASLCIPQDIAYAKLANLDPQYALYSSFVTPLVYAFMGSSRDIAIGPVAVVSLLLGSLLSDEISDTTSHDYLRLAFTATFFAGITQMTLGVFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKNFTKKTDIVSVMRSVWSTVHHGWNWETIVIGTAFLVFLLTTKYIAKKNKKLFWVAAISPMISLIVSTFFVYITRADKRGVSIVKHIKKGLNPSSASEIFFNGKYLGAGVRIGVISGMIALTEAVAIGRTFAAMKDYSLDGNKEMVAMGTMNVIGSLTSCYVTTGSFSRSAVNYMAGCKTAVSNIIMSIVLLLTLILITPLFKYTPNAVLASIIIAAVINLVNIEAVILLWKIDKFDFVACMGAFFGVVFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTIYRNIQQYPKATQITGMLIIRVDSAIYFSNSNYIKERILRWLTDEEAQRTSSGLPSIQYLIIEMSPVTDIDTSGIHAFEELYKNLQKREVQIILANPGPIVMEKLHASKLTDIIGQDKIFLTVADAVSIFGPKGEEVV*	659

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Apr1g1199	658	Gene3D	STAS domain	507	651	IPR036513	-
Apr1g1199	658	TIGRFAM	sulP: sulfate permease	83	646	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
Apr1g1199	658	Pfam	STAS domain	528	646	IPR002645	-
Apr1g1199	658	MobiDBLite	consensus disorder prediction	1	36	-	-
Apr1g1199	658	PANTHER	SULFATE TRANSPORTER	18	656	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
Apr1g1199	658	SUPERFAMILY	SpoIIaa-like	529	651	IPR036513	-
Apr1g1199	658	Pfam	Sulfate permease family	96	475	IPR011547	GO:0016021
Apr1g1199	658	PANTHER	HIGH AFFINITY SULFATE TRANSPORTER	18	656	-	-
Apr1g1199	658	ProSiteProfiles	STAS domain profile.	527	650	IPR002645	-
Apr1g1199	658	CDD	STAS_SulP_like_sulfate_transporter	528	643	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr1g1199	Apr-Chr1	20626694	20630228	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr1g1199	22	653	Inorganic Solute Cotransporters	AT1G22150	73.460	0.0	939

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr1g1199	K17470		-	gmx:100784124	1101.27

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr1g1199	1	20626694	20630228	Apr1g1199	1	20626694	20630228	ECH

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