Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1199 ATGAGTCAGCGTGTGAGTGACGAGGTTGTGGCAAAGGCCATGGGGGAAACAAGAAGTGGGCCTTCTTCACGTAGACATGGAGATACTTTGCCACATATTCACAAGGTGGGAGCACCTCCTAAGCAGACACTTTTCCAAGAGATAAAACATTCTGTCATAGAGACTTTCTTCTCAGACAACCCCTTTGAAAAATTTAAGGATCAAACCAAGTCTAGAAAGTTTGTTCTAGGCCTTCAATCTGTCTTTCCCATTTTTGACTGGGGGAGAGGTTATGATCTTAAGAAATTCAGAGGTGATTTGGTTGCTGGACTCACCATTGCAAGTCTTTGTATACCTCAGGACATTGCATACGCAAAGCTTGCAAATTTGGACCCCCAATATGCACTATATAGCAGTTTTGTGACTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCCATAGGACCCGTAGCTGTGGTGTCCCTCTTGCTTGGATCTTTGCTTTCAGATGAGATTAGTGACACCACAAGTCATGATTACCTGCGTCTAGCCTTTACTGCCACCTTCTTTGCTGGAATCACTCAAATGACACTTGGAGTTTTCAGGCTTGGTTTCTTAATTGACTTCCTTTCTCATGCTGCCATTGTGGGATTCATGGGTGGAGCTGCCATTACTATTGCATTACAACAGCTTAAAGGTTTTCTTGGCATAAAAAATTTCACTAAGAAAACGGATATTGTCTCTGTCATGCGCTCAGTTTGGAGTACAGTGCACCATGGGTGGAATTGGGAGACAATTGTCATTGGAACAGCATTCTTGGTCTTCCTTCTTACAACTAAGTATATTGCTAAAAAGAACAAGAAACTCTTTTGGGTGGCCGCAATTTCTCCAATGATTTCTCTTATAGTGTCTACCTTTTTTGTCTACATTACCAGGGCTGACAAAAGAGGAGTATCGATTGTGAAACATATTAAGAAGGGTTTGAATCCATCATCTGCTAGTGAGATTTTTTTCAATGGAAAATATCTGGGTGCTGGTGTTAGGATTGGTGTGATATCTGGTATGATAGCACTCACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATTCACTGGATGGTAACAAAGAAATGGTAGCAATGGGAACAATGAACGTTATTGGTTCACTTACATCTTGTTATGTGACTACAGGATCTTTTTCTCGTTCAGCAGTGAATTACATGGCTGGTTGTAAAACTGCTGTATCAAACATCATAATGTCCATAGTTTTGTTACTAACATTGATACTCATTACACCACTGTTTAAGTACACTCCAAATGCGGTGCTTGCTTCAATTATAATAGCTGCTGTGATTAACCTCGTGAACATTGAAGCAGTTATTCTGCTGTGGAAGATAGACAAATTTGATTTTGTGGCTTGCATGGGAGCCTTCTTTGGTGTGGTCTTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTGGCTATATCTTTTGCCAAAATCCTTTTGCAAGTGACAAGGCCAAGGACTGCAGTACTAGGGAAACTTCCAGGAACTACTATTTACAGGAACATCCAGCAATACCCCAAAGCGACCCAGATTACTGGGATGCTGATTATAAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATAAAGGAGAGAATTTTAAGATGGCTGACTGACGAAGAAGCCCAAAGGACCAGTAGTGGATTGCCCAGTATACAGTATCTCATTATTGAAATGTCACCTGTTACCGATATTGACACTAGTGGCATCCACGCCTTTGAAGAATTATACAAGAACCTTCAGAAAAGAGAAGTCCAGATTATCTTGGCAAACCCGGGGCCCATTGTAATGGAGAAGCTCCACGCATCCAAGTTAACAGACATAATTGGTCAAGATAAAATATTTCTAACAGTGGCTGATGCTGTTTCAATTTTTGGTCCAAAGGGTGAAGAAGTAGTATGA 1977 0.4117 MSQRVSDEVVAKAMGETRSGPSSRRHGDTLPHIHKVGAPPKQTLFQEIKHSVIETFFSDNPFEKFKDQTKSRKFVLGLQSVFPIFDWGRGYDLKKFRGDLVAGLTIASLCIPQDIAYAKLANLDPQYALYSSFVTPLVYAFMGSSRDIAIGPVAVVSLLLGSLLSDEISDTTSHDYLRLAFTATFFAGITQMTLGVFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKNFTKKTDIVSVMRSVWSTVHHGWNWETIVIGTAFLVFLLTTKYIAKKNKKLFWVAAISPMISLIVSTFFVYITRADKRGVSIVKHIKKGLNPSSASEIFFNGKYLGAGVRIGVISGMIALTEAVAIGRTFAAMKDYSLDGNKEMVAMGTMNVIGSLTSCYVTTGSFSRSAVNYMAGCKTAVSNIIMSIVLLLTLILITPLFKYTPNAVLASIIIAAVINLVNIEAVILLWKIDKFDFVACMGAFFGVVFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTIYRNIQQYPKATQITGMLIIRVDSAIYFSNSNYIKERILRWLTDEEAQRTSSGLPSIQYLIIEMSPVTDIDTSGIHAFEELYKNLQKREVQIILANPGPIVMEKLHASKLTDIIGQDKIFLTVADAVSIFGPKGEEVV* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1199 658 Gene3D STAS domain 507 651 IPR036513 -
Apr1g1199 658 TIGRFAM sulP: sulfate permease 83 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Apr1g1199 658 Pfam STAS domain 528 646 IPR002645 -
Apr1g1199 658 MobiDBLite consensus disorder prediction 1 36 - -
Apr1g1199 658 PANTHER SULFATE TRANSPORTER 18 656 IPR001902 GO:0015301|GO:0016020|GO:0055085
Apr1g1199 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Apr1g1199 658 Pfam Sulfate permease family 96 475 IPR011547 GO:0016021
Apr1g1199 658 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 18 656 - -
Apr1g1199 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Apr1g1199 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1199 Apr-Chr1 20626694 20630228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1199 22 653 Inorganic Solute Cotransporters AT1G22150 73.460 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1199 K17470 - gmx:100784124 1101.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1199 1 20626694 20630228 Apr1g1199 1 20626694 20630228 ECH