Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1181 ATGATGCCCTTTGTTTTGGTTCTCTTATTTTCATTCGTAATGGGCAGTTCTAAGGGTCAGCTTCAAGTGGGTTTCTACTCCAACACATGTCCTCAAGTGGAGTCCATTGTCCATGCAGTTGTTAGAGATGCTGTTCTCTCTGACCACAATATGGCTGCTGTCTTGCTCAGGCTTCATTTTCATGACTGCTTTGTTGAGGGGTGTGATGGTTCAATTCTGATCGATAATGGTCCACAATCAGAGAAACATGCATTTGGACATCAAGGGGTGAGAGGGTTTGATGTGATAGAAAGAGCCAAGGCAAAATTGGAAGCTTCTTGCCCTGGTGTGGTTTCTTGTGCAGACATAGTGGCATTAGCAGCCAGAGACTCTGTAGTCATGGCAAATGGTCCAGGATACCAAGTTCCAACAGGAAGGAGAGATGGGTTGGTCTCAAATGTTTCGTTTGCAGGTGATATGCCTGATGTTAGTAATTCAATTCAGCTACTCAAGGTCAAGTTTCTGAACAAGGGCCTCACAGTGAAAGACCTAGTCCTTCTCAGTGCTGCACACACAATTGGAACCACAGCATGCTTCTTTATGACGAAAAGATTGTACAACTTTTTCCCAGCTGGTGGGGGATCAGACCCTGCTATTAGCCCAAATTTCTTACCACAGCTGAAGGCTAAGTGCCCTCAGAATGGAGATGTTAACACTCGCTTAGCCATTGATGAAGGGAGTGAAAAGAAATTTGACATAAGCATCTTGAAGAACATAAGGGAAGGTTTTGCTGTGCTAGAATCTGATGCAAGGCTCAATGATGACATAGTCACCAAGAGTATTATTGACTCCTATTTTAGTCCCTTTGGTCCATTTTTTGGACCTTCTTTTGAAGCTGATTTTGTTGAGTCAGTTGTGAAGATGGGCCAACTTGGAGTCAAGACGGGTTTCCTTGGGAATATTAGGCGTGTGTGCTCTGCATTCAATTAA 969 0.4376 MMPFVLVLLFSFVMGSSKGQLQVGFYSNTCPQVESIVHAVVRDAVLSDHNMAAVLLRLHFHDCFVEGCDGSILIDNGPQSEKHAFGHQGVRGFDVIERAKAKLEASCPGVVSCADIVALAARDSVVMANGPGYQVPTGRRDGLVSNVSFAGDMPDVSNSIQLLKVKFLNKGLTVKDLVLLSAAHTIGTTACFFMTKRLYNFFPAGGGSDPAISPNFLPQLKAKCPQNGDVNTRLAIDEGSEKKFDISILKNIREGFAVLESDARLNDDIVTKSIIDSYFSPFGPFFGPSFEADFVESVVKMGQLGVKTGFLGNIRRVCSAFN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1181 322 PANTHER PEROXIDASE 5 320 - -
Apr1g1181 322 ProSiteProfiles Plant heme peroxidase family profile. 20 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 Gene3D Peroxidase, domain 2 154 301 - -
Apr1g1181 322 PANTHER PEROXIDASE 25-RELATED 5 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 Pfam Peroxidase 38 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Apr1g1181 322 SUPERFAMILY Heme-dependent peroxidases 20 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 Gene3D - 24 322 - -
Apr1g1181 322 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g1181 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 176 186 IPR019793 -
Apr1g1181 322 CDD secretory_peroxidase 20 321 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1181 Apr-Chr1 20346388 20349047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1181 4 322 Peroxidase AT1G77100 55.763 1.06e-114 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1181 K00430 - gmx:547549 553.518