Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1180 ATGATGGGTGTTGGAGCTGTTAAGGAAAACATCACAGCCATGCTTCTTGCTGGCTTTGCAGGCTTAATAGCTGGGGCTTGTAGCATGGCAATTGGAGAATTTGTCTCTGTGTATACTCAGTATGACATAGAGATGGCTAAAATAAAAAGAGATAAACAAGTTACTATTGGTCATGTAGGTGAATTAGAAACTCAAAGGGAGAAACTACCAAATCCATTTCAGGCTGCTATAGCATCAGCACTTGCATTTTCTGCGGGTGCTGTGGTGCCACTTCTAGCAGCTGCATTCATTAGGGGCTATAAGATTAGGCTAGCTGTTGTTGTTTCTGTGACTAGTTTGGCGTTGTTTGTATTTGGAGGGGCAGGAGCAGTGCTAGGAAAAACACCAGTGATAAAGTCCTGTGTCAGAGTGCTAATTGGAGGTTGGATGGCTTTGGCCACTACATTTGGCCTTACCAGGTTATTTGGATCAGCTGGACTTTGA 483 0.4369 MMGVGAVKENITAMLLAGFAGLIAGACSMAIGEFVSVYTQYDIEMAKIKRDKQVTIGHVGELETQREKLPNPFQAAIASALAFSAGAVVPLLAAAFIRGYKIRLAVVVSVTSLALFVFGGAGAVLGKTPVIKSCVRVLIGGWMALATTFGLTRLFGSAGL* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1180 160 Pfam VIT family 1 53 IPR008217 GO:0005384|GO:0030026
Apr1g1180 160 Pfam VIT family 63 152 IPR008217 GO:0005384|GO:0030026
Apr1g1180 160 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 157 IPR008217 GO:0005384|GO:0030026
Apr1g1180 160 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1180 Apr-Chr1 20326837 20327412 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1180 1 160 Nodulin-like Gene Family AT3G43660 64.375 3.60e-70 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1180 K22736 - gmx:100817158 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1180 1 20326837 20327412 Apr1g1180 1 20326837 20327412 ECH