Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1176 ATGGCAAACGATGGCATTCACCATGCTCCTGAACCCCTTAGCGACTCAAAAGTCTTCAACTTGGACGTGGAAGAGGGGACAGAGGTAAAGAGTTTTGACTATGCAAAGAGGGCACAGTGGCTGAGAGCAGCTGTTTTGGGTGCCAATGATGGGTTGCTCTCAACAGCATCTCTGATGATGGGTGTTGGAGCTGTGAGAAAGGATGTTAAGAGCATGATGCTAACTGGGATTGCTGGCTTGGTTGCTGGGGCATGTAGCATGGCCATTGGAGAGTTTGTTTCTGTTTATTCACAATATGATATTGAGCTGGCTCAGATGAAGAGAGAGGGAAAGGTGGATCAACAACAAAAGGAGAAGTTGCCTAACCCTTATTATGCTGCCTTTGCATCTGCTCTTGCTTTTGCCCTTGGTGCAGGTGTGCCTCTACTTGGTGCAGCCTTTGTTAAAGACTACAAGGTGAGGTTGGGGGTAGTGGTGGCTGTTGTGAGCCTTGCCTTGTTGGTATTTGGAGGGTTTGGTGCTTTTTTAGGGAAAGCACCCTTTGTGAAGTCATCTTTGAGGGTTTTGATTGGAGGATGGCTAGCCATGGCACTTACTTTTGGTTTAACCAAGCTTGTAGATCATGTTGGAGTTTGA 636 0.4701 MANDGIHHAPEPLSDSKVFNLDVEEGTEVKSFDYAKRAQWLRAAVLGANDGLLSTASLMMGVGAVRKDVKSMMLTGIAGLVAGACSMAIGEFVSVYSQYDIELAQMKREGKVDQQQKEKLPNPYYAAFASALAFALGAGVPLLGAAFVKDYKVRLGVVVAVVSLALLVFGGFGAFLGKAPFVKSSLRVLIGGWLAMALTFGLTKLVDHVGV* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1176 211 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 3 207 IPR008217 GO:0005384|GO:0030026
Apr1g1176 211 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 3 207 - -
Apr1g1176 211 Pfam VIT family 41 115 IPR008217 GO:0005384|GO:0030026
Apr1g1176 211 Pfam VIT family 106 203 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1176 Apr-Chr1 20303256 20303891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1176 14 211 Nodulin-like Gene Family AT3G43660 71.717 1.20e-96 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1176 K22736 - gmx:121175311 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1176 1 20303256 20303891 Apr1g1176 1 20303256 20303891 ECH