Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1172 ATGAAGGATATGTGCAATGTAGTGCAGGGTTTGAAGCCTATGCTATTAATGATAGTGGTGCAAATAACATTTGCTGGAGTCAATGTGCTCTACAAGCTTGCCGTAAATGATGGCATGAGCTTGAGGGTTGTTGCTGCCTACCGCTTTCTATTCGCAACTGCTTTCATAGCTCCACTTGCCCTCATTGTTGAAAGGAAGAAGAGGCCAAAGATGACTTGGACAGTACTGTTTCAGTCATTCTTGTGCGGTTTATTTGGAGGGTCAATGGCTCAAAACTTCTACTTAGAGGCTCTGAGTTTAACTTCTGTAACATTTGCATCTGCAATGACCAACCTTATACCAGGCCTGACATTTATCATGGCCGTTTCCTTCGGTATGGAGAGAGTAAATTTGAGATCAGCAGCAGGGAAGGCCAAAATACTCGGTACATTAATTGGAATTGGTGGGGCAATGATACTAACTTTCATTAAAGGTGCGGAAATCAAATTTGGGGCCTTCCACTTAAATCTTTTGCATCACAGAAACGGTGCGCACTCACAGGCTATTAGCGGTGGTAAACCCGTTTTGGGTGCTCTAATGGCCCTCTCAAGTGCCATCTCTTATGCACTGTGGCTCATTATTCAGGCAAAGATGAGTGAAAGATATCCAAGTCATTATTCAAGCACGGCGATGATGTCTTTATGGGGGTCACTGCAATCCATTGTGTTTGCTCTATGCTTTGAGAGGGACTGGAGTCAGTGGAGGTTGGGTTGGAATGTTAGGCTTTTGACTGTAGCCTATTCGGGTATAGTGGTCTCTGGGGTGATGGTGGTTGTGATTTCGTGGTGTATTCGCATGAGAGGGCCATTATTCGCCTCTGTTTTTAGCCCCCTAATGCTTGTGATGGTGGCCTTGGCTGGTGCTACGATGTTGAACGAGAATCTACATCTTGGATGCATCATTGGAGCAGTATTGATCGTGTGTGGGTTATACGTGGTTCTGTGGGGTAAAAGCAAAGAGATGAAGAAGAAGAATCAATTAGTGCCAGCACAAGGCACCCCTGAGTCTAACACAGTGGAAATAGTTGTGAGCTCCGCAGTAGAAGATAAAAGCAACCATAATAACAACACACATCATATGGATGATTCATCCGCAGAGGAGCACTGCTCACATTTACACAATTAG 1164 0.4459 MKDMCNVVQGLKPMLLMIVVQITFAGVNVLYKLAVNDGMSLRVVAAYRFLFATAFIAPLALIVERKKRPKMTWTVLFQSFLCGLFGGSMAQNFYLEALSLTSVTFASAMTNLIPGLTFIMAVSFGMERVNLRSAAGKAKILGTLIGIGGAMILTFIKGAEIKFGAFHLNLLHHRNGAHSQAISGGKPVLGALMALSSAISYALWLIIQAKMSERYPSHYSSTAMMSLWGSLQSIVFALCFERDWSQWRLGWNVRLLTVAYSGIVVSGVMVVVISWCIRMRGPLFASVFSPLMLVMVALAGATMLNENLHLGCIIGAVLIVCGLYVVLWGKSKEMKKKNQLVPAQGTPESNTVEIVVSSAVEDKSNHNNNTHHMDDSSAEEHCSHLHN* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1172 387 PANTHER WAT1-RELATED PROTEIN 12 362 - -
Apr1g1172 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Apr1g1172 387 MobiDBLite consensus disorder prediction 364 387 - -
Apr1g1172 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 332 - -
Apr1g1172 387 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Apr1g1172 387 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020|GO:0016021
Apr1g1172 387 MobiDBLite consensus disorder prediction 365 387 - -
Apr1g1172 387 PANTHER WAT1-RELATED PROTEIN 12 362 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1172 Apr-Chr1 20247859 20253090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1172 1 335 Nodulin-like Gene Family AT1G68170 45.373 7.47e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1172 - - gmx:100810649 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2037 3 36368712 36371690 Apr1g1172 1 20247859 20253090 PCT