Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1171 ATGACTTGGACGATATTGTTTCAGGCATTTCTTTGCGGCTTAATTGGTGGAGCATTGCCTCAAAACTTAAACATGGAAGCGCTTGCTTTAACTTCTGTAACGTTTACAACTGCAATAACCAACCTCATTCCAGCCATCACCTTTATCATATCCCTCTCCATCGGATTGGAAAGACTAAATTTGAGAACAGCAGGAGGGAAGGCAAAGATAATTGGAACGATAACTGGAATTAGTGGGGCAATGGTACTGACATTCGTTAAAGGCCCCGAAATTGAGATGCTATCTTTCCACGTAAACCTTTTCAACAACCGAAGCAGAAAAAGCCATGTGGTTCACTCACACTCTGCCTCCGGTTTTGTTACCATGTTGGGTGCTCTCGCCTCTGTCGCAAGCAACATCTCTTATGCTCTCTGGCTTATCATTCAGGCAAAGATGAGTGAAAGATACCCATGTCCTTATTCGAGCACTGCGTTGATGTCCCTAATGGGGGCACTGTTATCCATTTCGTTTGCTTTTTGCCTTGATAGGGATTTGAGTCAGTGGAGGTTGGGTTGGAATGTTAGGCTACTAACTGTAGCTTATGCGGGTATAGTGGTTTCTGGAGTGATGGTGGCAGTGATTTCGTGGTGCGTACGCACGAGAGGCCCATTGTTTGTCTCTGTTTTTAGCCCTCTAATGCTTGTGGTTGTGGCCTTCGCTGGATCCACGATTTTGGATGAGAAGCTATACCTTGGAAGCATCATTGGATCAGTGTTGATTATATGCGGATTGTACGTGGTTCTATGGGGTAAAAGCAAAGAGATGACAAAGAATCAATCTATTCCATCAGAAAGCACCCATAAATCTGACACTGTCGAAGTAGTCGTCAAAACTCAAGAAGATAAATGCAACAATAAGAACAATACGCTTGCAGATGCGGTTCAAGGTAATGAAGATTCATCGGAAAATGGACCTGAAAACCATGAAACCCACATACAGTACGAGGCGAGGGAAGAAGTAATATCTCGAAAAGCCTCACATACCTAA 1026 0.4366 MTWTILFQAFLCGLIGGALPQNLNMEALALTSVTFTTAITNLIPAITFIISLSIGLERLNLRTAGGKAKIIGTITGISGAMVLTFVKGPEIEMLSFHVNLFNNRSRKSHVVHSHSASGFVTMLGALASVASNISYALWLIIQAKMSERYPCPYSSTALMSLMGALLSISFAFCLDRDLSQWRLGWNVRLLTVAYAGIVVSGVMVAVISWCVRTRGPLFVSVFSPLMLVVVAFAGSTILDEKLYLGSIIGSVLIICGLYVVLWGKSKEMTKNQSIPSESTHKSDTVEVVVKTQEDKCNNKNNTLADAVQGNEDSSENGPENHETHIQYEAREEVISRKASHT* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1171 341 PANTHER WAT1-RELATED PROTEIN 1 298 - -
Apr1g1171 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 75 - -
Apr1g1171 341 MobiDBLite consensus disorder prediction 315 341 - -
Apr1g1171 341 MobiDBLite consensus disorder prediction 299 341 - -
Apr1g1171 341 Pfam EamA-like transporter family 123 261 IPR000620 GO:0016020|GO:0016021
Apr1g1171 341 MobiDBLite consensus disorder prediction 299 314 - -
Apr1g1171 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 161 265 - -
Apr1g1171 341 PANTHER WAT1-RELATED PROTEIN 1 298 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1171 Apr-Chr1 20228419 20233516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1171 16 307 Nodulin-like Gene Family AT1G68170 44.863 1.75e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1171 - - gmx:100810120 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1171 1 20228419 20233516 Apr3g2038 3 36377508 36381715 PCT