Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1165 ATGAGTAGGGAGATAAAATTTGAGGTGACAGGGAGAAAATGCATCAAACCCTCCACGGCCACACCACCGCAACTCAAAACCTTCAAACTCAATTTACTAGACCAACTTTCACCAAACATTCATGGCAACATCACCTTCTTCTACTCACACGACCCCACCACCCACTTCTCCACAAAATCTCAACTCCTTCAAAACTCTCTCTCCCAAGTGTTGACCCTCTTCTACCCTCTCGCAGGTCGCCTTCAAGACTCTGCCATCCACTGCAACGACGAAGGCGCTTTCTTCATTGAAACTCGAACCAATATCCCTCTCTCCGACATCCTTACATCTCCAGATTTCGACGCCCTCCAATGTTTCCTCCCCACCACCGACAATGAAACGATGGCAACCTCAAACGGTTCCTTGCTCCTCGTCCGTTTCACCTCGTTCGCTTGTGGCGGCACCGCTGTTACCCTATCCCTCTCTCACAAGCTTGCTGACATGGCATCTTTGATGGTACTCCTCAAGAGTTGGACCGCCGTGTGCAATGGAGCCACCGCACTAGTGGTCCCCGACCTCAGCATCGGTGCTACTCTCTTTCCTCCGAGAGATATTCCTGGCATGTCAGCTTCTGTAAACACGGTCTCTACGGTGAATTTCACAACAAAAAGGTTGGTTTTCGAGGCTTCCAAGGTTAAAGAACTAAAGAGCAAAGTGAAAACGAGGTTTGACCCTTCCAGGGTGGAGGTAGTTTTGGCGCTAATTTGGAAATGTGCTTTGTTGGCATCTCGCTCCAAAACGACGTCATTTAAGCATTCGATTTTGTTTCAAGCTGTGAACCTCCGTCCTCGCATGGAGCCACCTGTTCCCGACACCGCAGTGGGGAACTTTATATGGGCTTTCGCGGTGACGGTGGAGAAAGGTAGTGACATGGAGTTGCATGTGATGGTGAGTAGGATGAGGGACAATATGAATGAGTTTATGAAAACAAAGGCAGAAAAATTCAAAGAAGAAGGTGCATTTGGGGTTGTGATGGAGAGTATGAAGGAAAGGGGTGAAGTATTGAGGGAGAGAGAGTGTGTTATGGTTTTTAAGTGTTCAAGTTGGTGTAATTTTCCACTTCTTAAGGTTAATTTTGGGTGGGGTGAAGCTGTGTGGATGTCAAGTGTGAATAAATATGTTAGTAATACCATTGCTCTGATGGATACCAAGGATGGTGGGATTGAAGCCTTTGTCACTCTTGATCAACAACAGATGGCCTTGTTTGAACAAGACCAGGAGCTCCTACACTATGCTTTGATTAATCCCAGTGTTATAATTTGA 1302 0.4677 MSREIKFEVTGRKCIKPSTATPPQLKTFKLNLLDQLSPNIHGNITFFYSHDPTTHFSTKSQLLQNSLSQVLTLFYPLAGRLQDSAIHCNDEGAFFIETRTNIPLSDILTSPDFDALQCFLPTTDNETMATSNGSLLLVRFTSFACGGTAVTLSLSHKLADMASLMVLLKSWTAVCNGATALVVPDLSIGATLFPPRDIPGMSASVNTVSTVNFTTKRLVFEASKVKELKSKVKTRFDPSRVEVVLALIWKCALLASRSKTTSFKHSILFQAVNLRPRMEPPVPDTAVGNFIWAFAVTVEKGSDMELHVMVSRMRDNMNEFMKTKAEKFKEEGAFGVVMESMKERGEVLRERECVMVFKCSSWCNFPLLKVNFGWGEAVWMSSVNKYVSNTIALMDTKDGGIEAFVTLDQQQMALFEQDQELLHYALINPSVII* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1165 433 Gene3D - 211 425 IPR023213 -
Apr1g1165 433 PANTHER VINORINE SYNTHASE-RELATED 4 433 - -
Apr1g1165 433 Pfam Transferase family 6 421 - -
Apr1g1165 433 Gene3D - 4 201 IPR023213 -
Apr1g1165 433 PANTHER F21J9.9 4 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1165 Apr-Chr1 20158330 20159631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1165 5 417 Monolignol Biosynthesis Gene Families AT5G48930 22.757 7.56e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1165 - - gmx:100808502 589.341