Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1164 ATGACATCGTCGAAGGTGGATCTGCCACGACAGGGTTCAGTTTCAAACCTGTTAGCGGACGAGGTTTGGGAAGAAGTAGTTGGCGGCGCCACTGAATCGACAATAAGCCTCGAAGATTTCTTAACAAAGGCAACCTCTGTTGTGAGAAACGACACCGTACGAGGAAAGAGGAAGGCCGTGGAAGAACCCTTAGATAAGGCCACTCTTCAGAAACAAAGAAGGATGATAAAGAACAGAGAGTCTGCTGCTAGGTCCAGGGAACGCAAGCAGGCTTACACGGTTGAGCTAGAGTCTTTGGTTACACATCTGGAGAAAGAGAATGCTCTCTTGTTGAAGGAAGAGGCTGATAGGAAAAGGCAGAGGTTTGAACAGCTCATGGAGTGCCTCGTTTCAGTTGAGGAGAAGCCTAGACTGAAAAAAAAGCTTCGAAGAGTGAACTCAACTCAATGGTGA 453 0.4746 MTSSKVDLPRQGSVSNLLADEVWEEVVGGATESTISLEDFLTKATSVVRNDTVRGKRKAVEEPLDKATLQKQRRMIKNRESAARSRERKQAYTVELESLVTHLEKENALLLKEEADRKRQRFEQLMECLVSVEEKPRLKKKLRRVNSTQW* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1164 150 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 73 88 IPR004827 GO:0003700|GO:0006355
Apr1g1164 150 Pfam bZIP transcription factor 67 124 IPR004827 GO:0003700|GO:0006355
Apr1g1164 150 PANTHER OS05G0437700 PROTEIN 17 149 - -
Apr1g1164 150 SUPERFAMILY Leucine zipper domain 70 120 IPR046347 GO:0003700|GO:0006355
Apr1g1164 150 Gene3D - 69 123 - -
Apr1g1164 150 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 17 149 IPR043452 GO:0003700|GO:0045893
Apr1g1164 150 CDD bZIP_plant_BZIP46 70 112 - -
Apr1g1164 150 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 68 120 IPR004827 GO:0003700|GO:0006355
Apr1g1164 150 Coils Coil 105 125 - -
Apr1g1164 150 SMART brlzneu 66 128 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1164 Apr-Chr1 20147571 20149272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1164 20 150 bZIP Transcription Factor Family AT5G44080 39.378 9.33e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr1g1164 bZIP_1 8.8e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1164 K14432 - gmx:100101878 149.828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1164 1 20147571 20149272 Apr1g1164 1 20147571 20149272 ECH