Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1156 ATGCCGAAGTCGAAGCGAAATAGACAAGTTACGCTGTCGAAGACGAAGAAAAAGGGAAGGGATCACAAAGAGGCGATAGTGAACGCAATAAAAGAAGCAGCTGAAAAGTACAGTTCAGTTTACGTGTTTTCGTTTGAGAACATGAGGAATCAAAAATTCAAACAGTTCAGGGAACAGTTGAAATCGAGTAGCAGGTTCTTTCTGGGTTCAAACAAAGTAATGCAAGTCTCTCTAGGTCGTTCTGCTTCTGATGAGATTAGATCAGGCCTTCACAAGGTTTCAAAGCTATTGCGCGGAGATGCTGGGATGGTTTTTACGAATTTGCCTAAAGAAGAAGTTGAACGGCTGTTTAAAGATTTTGAGGAATATGATTTTGCAAGAACAGGAACTGTTGCCACTGAATCGGTTGATCTCAAAGAGGGTCCTTTAGATCAGTTCACACATGAGATGGAACCTTTTCTCCGGAAGCAGGGCATGCCTGTTCGGTTAAATAAAGGAGTTGTGGAGCTTGTTTCTGATTTTATTGTTTGTGAGGAGGGGAAGCCCTTGTCACCTGAGGCTGCTCGCATACTGCGTTTACTGGGAATCAAGATGGCTACATTTCGACTTAACCTAATTTGCAGGTGGAGTCCCGATGATTTTGAACTTTACATTGATGGGCCTGAAGAATCAGATGTCGAATGA 684 0.4269 MPKSKRNRQVTLSKTKKKGRDHKEAIVNAIKEAAEKYSSVYVFSFENMRNQKFKQFREQLKSSSRFFLGSNKVMQVSLGRSASDEIRSGLHKVSKLLRGDAGMVFTNLPKEEVERLFKDFEEYDFARTGTVATESVDLKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFIVCEEGKPLSPEAARILRLLGIKMATFRLNLICRWSPDDFELYIDGPEESDVE* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1156 227 Gene3D - 125 198 IPR043164 -
Apr1g1156 227 PANTHER RIBOSOME ASSEMBLY FACTOR MRT4 1 227 - -
Apr1g1156 227 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 227 - -
Apr1g1156 227 SUPERFAMILY Ribosomal protein L10-like 20 143 IPR043141 -
Apr1g1156 227 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Apr1g1156 227 Pfam Ribosomal protein L10 19 120 IPR001790 -
Apr1g1156 227 MobiDBLite consensus disorder prediction 1 16 - -
Apr1g1156 227 MobiDBLite consensus disorder prediction 1 22 - -
Apr1g1156 227 Gene3D - 30 211 IPR043141 -
Apr1g1156 227 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1156 35 226 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 22.959 3.63e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1156 K14815 - gmx:100500064 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1156 1 20028528 20030982 Apr1g1156 1 20028528 20030982 ECH