Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr1g1128 | ATGAAGATTGTTGTGTTCTTTGCAGTGTTTCTTCTTCTTCTATTCATGAGCTCAGCAGCTCCATCTCCTCCCTCCTCTACATCATCAGCAGCATGCCCTATGGACTTGAATTACGTGCTTAGAATCCCATGGAACTCTTCTGCTTGCCAAAGCTTCCACCCTTCGACATCAAAAAATGTAACAAATCCAAGCACTTGTTGCATATCACTGTTGTCCCTCTTTGGCATAGGATTGGCACAGCACCTCAAAGAGACCTCTCAGTTCCAACTTCCCAACCTTGCCACCTCCATTTCATGCCTTGAAGACTTCCAATCAAAGCTCACTTCTCTCTCACTCTCCAACAACCTCGTCAATTCTTGCTTTGACCCTCTTCAGTTCGTCATCTCTCCCAACATCTGTGCTGGAATTCAGACCATCCCTGATTGGATCACCAAGCTTGGTCAATCCACGTCACTCAACACTGCGTGTAAACCAGATCTTACTGATCTTTCCCTCTGTGATCAGTGTCTTGCGGCTGGGTTACAGGTCAAGCAGAAGCTTATTTCCATTGATGGTAATGCTTCACATTCCATAGATTGTTTTTACTTCGCCATTCTATATGCTGCTGGAATAGTCAATAAGTTTGGGCCTGAAAGCAATGGTGCTGTGACTTGCATTTTTAGCATGTCAGTTTATTCACAAGGAGAGTCTGGGGGAAAGGGTCATCAGGCTCTTGTGTTTGGGTTGACAGGAGCTGGAGTTGCATTGTTGGTGATGTCTTCTTTGTTGGGGTTGTATGTGTGGTATGACAGGAAGTGTCGGAGGAAAAAGCTTGAGACTTTTCAGTTCGATTTTGACCCTGAGGAACAAGGGTCTAGGCCTAGATTGAGACCCAATACGGGCTCCATTTGGTTCAAAATTGAGGAACTTGAGAAGGCTACGGATAATTTTTCATCCAAGAACTTCATAGGGCGGGGGGGATTTGGGATGGTTTTCAAGGGAACCTTGTCTGATGGAACTGTGGTTGCGGTTAAAAGGATTCTGGAATCTGATTTTCAAGGGGATGTTGAGTTTTGTAATGAGGTGGAGATTATTAGCAATCTAAAGCACCGTAATCTTGTGCCTCTTAGAGGCTGTTGTGTGGCTGAAGAGGATGAGGATTATGCTGACAGGGGAAGCCAAAGGTATCTTGTATATGATTACATGCCTAATGGGAACCTGGAAGACCATCTCTTTGCATCAACGGACACTCCGAAATTAGCAAAGAGATCATTGACTTGGCCTCAGAGAAAGAGCATAATCTTGGATGTGGCAAAGGGGTTGGCTTATTTGCACTATGGAGTTAAACCTGCAATCTATCACAGGGATATCAAAGCCACCAATATACTACTTGATGCAGATATGAGGGCAAGAGTTGCGGATTTTGGGCTTGCTAAACAAAGCAGGGAGGGTCAGTCTCATCTCACTACTAGAGTGGCTGGAACACATGGTTATCTAGCCCCGGAATATGCACTCTATGGTCAACTCACTGAGAAGAGTGATGTGTATAGCTTTGGTGTGGTTGTTTTGGAGATAATGTGTGGGAGAAAAGCTCTAGATTTGTCTTCATCAGGATCACCCCGGGCATTCTTGATCACGGATTGGGCTTGGTCATTGGTGAAAGCTGGCAAGATAGAAGAGGCTTTGGATGCTTCCCTGTTGAAAGATGAGAATTTTCCTAGTTCAAATCCTAAGAGCATAATGGAAAGGTTTTTGCTGGTGGGAATCCTGTGCTCTCATGTAATGGTTGCTTTGAGGCCAACTATTGCTGATGCTTTGAAGATGTTGGAAGGTGATATTGAAGTTCCACAAATCCCAGATCGCCCTATGCCTCTTGGCCATCCTTCATTTTACAATGATAGCAACACTTTTAGCATATCTCCAGCATTAAGCGGCCCCAAATTGCACTCTGGAGACATGCTCAGGTAA | 1947 | 0.4463 | MKIVVFFAVFLLLLFMSSAAPSPPSSTSSAACPMDLNYVLRIPWNSSACQSFHPSTSKNVTNPSTCCISLLSLFGIGLAQHLKETSQFQLPNLATSISCLEDFQSKLTSLSLSNNLVNSCFDPLQFVISPNICAGIQTIPDWITKLGQSTSLNTACKPDLTDLSLCDQCLAAGLQVKQKLISIDGNASHSIDCFYFAILYAAGIVNKFGPESNGAVTCIFSMSVYSQGESGGKGHQALVFGLTGAGVALLVMSSLLGLYVWYDRKCRRKKLETFQFDFDPEEQGSRPRLRPNTGSIWFKIEELEKATDNFSSKNFIGRGGFGMVFKGTLSDGTVVAVKRILESDFQGDVEFCNEVEIISNLKHRNLVPLRGCCVAEEDEDYADRGSQRYLVYDYMPNGNLEDHLFASTDTPKLAKRSLTWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSSGSPRAFLITDWAWSLVKAGKIEEALDASLLKDENFPSSNPKSIMERFLLVGILCSHVMVALRPTIADALKMLEGDIEVPQIPDRPMPLGHPSFYNDSNTFSISPALSGPKLHSGDMLR* | 649 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr1g1128 | 648 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE-RELATED | 25 | 646 | - | - | |
Apr1g1128 | 648 | SMART | serkin_6 | 310 | 602 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g1128 | 648 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 32 | - | - | |
Apr1g1128 | 648 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 25 | 646 | - | - | |
Apr1g1128 | 648 | Gene3D | Transferase(Phosphotransferase) domain 1 | 395 | 610 | - | - | |
Apr1g1128 | 648 | CDD | STKc_IRAK | 316 | 604 | - | - | |
Apr1g1128 | 648 | Pfam | Protein kinase domain | 312 | 532 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g1128 | 648 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 445 | 457 | IPR008271 | GO:0004672|GO:0006468 | |
Apr1g1128 | 648 | Pfam | SPARK | 27 | 194 | IPR043891 | - | |
Apr1g1128 | 648 | ProSitePatterns | Protein kinases ATP-binding region signature. | 316 | 338 | IPR017441 | GO:0005524 | |
Apr1g1128 | 648 | ProSiteProfiles | Protein kinase domain profile. | 310 | 623 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g1128 | 648 | Gene3D | Phosphorylase Kinase; domain 1 | 281 | 394 | - | - | |
Apr1g1128 | 648 | SUPERFAMILY | Protein kinase-like (PK-like) | 289 | 603 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr1g1128 | Apr-Chr1 | 19515107 | 19518160 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr1g1128 | 25 | 648 | Receptor kinase-like Gene Family | AT1G11050 | 66.720 | 0.0 | 838 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RKF3 | Apr1g1128 | Pkinase | 5.8e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr1g1128 | - | - | gmx:100806560 | 1119.38 |