Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1126 ATGGAGAGAAACTTCAGCTCATATAATCCTCAACTAGCCTCTAGCTTGAAAAAGACTTACAAGACGCAGGAGCATCATCATCTTAAAGAAGATTGTATGTCTCCATCTTTCAGTCTACGGAATGTTTCAAAGCTCATTCTTCCTCCACTGGGTGTCTCAAGCCAGAATCCAGTGAGCACAAAAGGATGGATCATATCTCCAATGGATTCAAGATACAGGTGTTGGGAGAGTTTTATGGTTCTTCTGGTGGCTTATTCTGCATGGGTGTACCCCTTTGAAGTTGCTTTCATGCATTCTTCAAAAAATAAGAAAATATATATTGCGGACACTTTTGTTGATCTTTTCTTCGCTATTGACATTGTTTTGACATTCTTCGTGGCTTACATTGATCCAACAACTCATCTACTAGTTCGAGACTCCAAAAAGATTGTAGTGAGGTACTTGTCAACATGGTTCGTGATGGATGTGGCATCAACTATACCATATGAGGCACTTGGGTATTTGTTCACTGGCAAACACAAAGTGGGTCTTCCATATTTCCTGTTGGGCATGCTCAGATTTTGGAGAATCAGACGTGTCAAGCAATATTTCACAAGGCTTGAGAAAGACATCAGGTTCAGCTATTTCTGGGTTCGATGTGCTAGGCTTCTTTCTGTAACACTTTTTTCAGTTCATTGTGCTGGTTGTCTCTATTACATGCTAGCTGATCGCTACCCGCACCAAGGAAAGACATGGATTGGAGCTGTGATTCCTAACTTCCGAGAGACAAGCCTTCGAATCAGATACATTTCAGCCATATACTGGTCCATCACTACTATGACCACCGTAGGTTATGGTGACCTCCATGCCGTGAACACCATGGAAATGATCTTCATTATTTTCTACATGCTCTTCAACCTTGGCCTAACAGCTTATTTGATTGGCAACATGACAAATCTTGTTGTTGAAGGAACTCGCCGTACCATGGAATTTAGAAATAGCATTGAAGCAGCATCGAACTTTGTGTGCCGAAATCGGTTGCCCCCAAGGTTGAGAGAGCAAATCTTGGCTTACATGTGTTTAAGATTTAAGGCAGAGAGCTTGAATCAACATCAGCTTATTGAACAGCTACCGAAGTCAATTTGCAAAAGCATCTGCCGGCATTTGTTTTCTGCTACTGTGGAGAAAGTCTATCTATTCAAAGGGGTCTCAAAAGAAATTATTTTGTCCCTCGTAGCAAAAATGAAGGCAGAATACATACCACCTAGAGAGGATGTTATCATGCAAAATGAAGCACCAGATGATGTGTACGTTATAGTGTCAGGAGAAGTGGAGATCATAGATAGTGTAATGGAGAAAGAGAGAATATTGGGGACCCTACAAACAGGAGACATGTTCGGAGAGGTTGGTGCACTTTGTTGTAGACCTCAGAGCTATACCTACAGAACCAAGACTCTCACACAGCTCCTGAGGCTGAAAACTAATGCTCTTATAGAAGCAATGCAGATTAAAAAAGAAGACAATATACAAATACTCAAAAATTTCCTTCAGCATTTCAAGCAGCTTAAGGATCTTAGTATCAGAGATTTAATGGTGGAGAATGTGGAAGAAGATGACCCTAACATGGCTGTGAACTTGTTAACTGTGGCAAGCACAGGCAATGCTGCTTTTCTTGAGGAGCTTCTTAGAGCAGGTTTGGATCCTGACATTGGGGACTCCAAAGGGAAAACCCCATTGCACATCGCAGCATCAAATGGATATGAAGAGTGTGTTAAAGTCCTACTCAAACATACATGCAACATCCATATAAGAGACATGAATGGTGACACTGCATTATGGGATGCTATATCATCAAAACATTACTCCATATTCCGGATCCTTTATCAGCTTGCAGCCCTCTCTGATCCAAACATAGCAGGCCATCTCCTGTGTACAGCAGCAACAAGAAATAAATTAACAGTGATAAATGATCTTTTAAAGCAAGGCTTAAACATAGACTCGGAAGATCACCATGGTACAACTGCAATCCAAGTTGCCATGGCAGAAAATCATGTGGACATGGTTCGGTTGCTTGTCATGAATGGTGCAGATGTTTCTAATGTACATGATCATGAATTTTCTTCATGCACCTTAAATGAAATGCTGCAGAAGCAAGAGCATGAGCAAATTTGGGGAAGATCTAATGGACTATATTTTCGAAGAGTGAGCATATATAGAGGTCACCCTGTGGTAAGAAGAGAAAAAGGTTTCATGGAACCTGGGAGACTAATAAGGTTGCCTGATTCATTAGAAGACCTCAAAAATGTAGCAGGTGAAAAACTTGGGTTCGATGCAAAAGATGCAATGGTGACAAATGAAGAAGGAGCAGAAATAGACTCTATTGATGTGATCAGAGATAATGATAAACTCTTTTTGGTTGAATAG 2403 0.4078 MERNFSSYNPQLASSLKKTYKTQEHHHLKEDCMSPSFSLRNVSKLILPPLGVSSQNPVSTKGWIISPMDSRYRCWESFMVLLVAYSAWVYPFEVAFMHSSKNKKIYIADTFVDLFFAIDIVLTFFVAYIDPTTHLLVRDSKKIVVRYLSTWFVMDVASTIPYEALGYLFTGKHKVGLPYFLLGMLRFWRIRRVKQYFTRLEKDIRFSYFWVRCARLLSVTLFSVHCAGCLYYMLADRYPHQGKTWIGAVIPNFRETSLRIRYISAIYWSITTMTTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLREQILAYMCLRFKAESLNQHQLIEQLPKSICKSICRHLFSATVEKVYLFKGVSKEIILSLVAKMKAEYIPPREDVIMQNEAPDDVYVIVSGEVEIIDSVMEKERILGTLQTGDMFGEVGALCCRPQSYTYRTKTLTQLLRLKTNALIEAMQIKKEDNIQILKNFLQHFKQLKDLSIRDLMVENVEEDDPNMAVNLLTVASTGNAAFLEELLRAGLDPDIGDSKGKTPLHIAASNGYEECVKVLLKHTCNIHIRDMNGDTALWDAISSKHYSIFRILYQLAALSDPNIAGHLLCTAATRNKLTVINDLLKQGLNIDSEDHHGTTAIQVAMAENHVDMVRLLVMNGADVSNVHDHEFSSCTLNEMLQKQEHEQIWGRSNGLYFRRVSIYRGHPVVRREKGFMEPGRLIRLPDSLEDLKNVAGEKLGFDAKDAMVTNEEGAEIDSIDVIRDNDKLFLVE* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1126 800 ProSiteProfiles Ankyrin repeat region circular profile. 567 598 - -
Apr1g1126 800 PRINTS EAG/ELK/ERG potassium channel family signature 109 119 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr1g1126 800 PRINTS EAG/ELK/ERG potassium channel family signature 120 129 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr1g1126 800 PRINTS EAG/ELK/ERG potassium channel family signature 262 279 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr1g1126 800 PRINTS EAG/ELK/ERG potassium channel family signature 288 299 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr1g1126 800 PRINTS EAG/ELK/ERG potassium channel family signature 306 315 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr1g1126 800 SMART ANK_2a 534 563 IPR002110 GO:0005515
Apr1g1126 800 SMART ANK_2a 600 631 IPR002110 GO:0005515
Apr1g1126 800 SMART ANK_2a 664 693 IPR002110 GO:0005515
Apr1g1126 800 SMART ANK_2a 567 596 IPR002110 GO:0005515
Apr1g1126 800 PANTHER POTASSIUM CHANNEL AKT2/3-LIKE 26 713 - -
Apr1g1126 800 PANTHER POTASSIUM CHANNEL AKT2/3-LIKE 727 800 - -
Apr1g1126 800 SUPERFAMILY Ankyrin repeat 499 694 IPR036770 -
Apr1g1126 800 ProSiteProfiles cAMP/cGMP binding motif profile. 392 511 IPR000595 -
Apr1g1126 800 ProSiteProfiles KHA domain profile. 727 800 IPR021789 -
Apr1g1126 800 Pfam Ankyrin repeats (3 copies) 543 623 IPR002110 GO:0005515
Apr1g1126 800 Pfam KHA, dimerisation domain of potassium ion channel 726 798 IPR021789 -
Apr1g1126 800 Pfam Cyclic nucleotide-binding domain 412 495 IPR000595 -
Apr1g1126 800 PRINTS Ankyrin repeat signature 568 583 IPR002110 GO:0005515
Apr1g1126 800 PRINTS Ankyrin repeat signature 680 694 IPR002110 GO:0005515
Apr1g1126 800 SMART cnmp_10 392 509 IPR000595 -
Apr1g1126 800 SUPERFAMILY cAMP-binding domain-like 319 511 IPR018490 -
Apr1g1126 800 Pfam Ion transport protein 73 321 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr1g1126 800 ProSiteProfiles Ankyrin repeat profile. 664 696 IPR002110 GO:0005515
Apr1g1126 800 Gene3D Jelly Rolls 359 532 IPR014710 -
Apr1g1126 800 Gene3D - 73 315 - -
Apr1g1126 800 ProSiteProfiles Ankyrin repeat region circular profile. 664 692 - -
Apr1g1126 800 PANTHER POTASSIUM CHANNEL AKT1 26 713 IPR045319 GO:0005249|GO:0006813
Apr1g1126 800 PANTHER POTASSIUM CHANNEL AKT1 727 800 IPR045319 GO:0005249|GO:0006813
Apr1g1126 800 SUPERFAMILY Voltage-gated potassium channels 67 315 - -
Apr1g1126 800 ProSiteProfiles Ankyrin repeat profile. 567 599 IPR002110 GO:0005515
Apr1g1126 800 CDD CAP_ED 392 505 IPR000595 -
Apr1g1126 800 Gene3D - 536 717 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1126 Apr-Chr1 19475137 19481815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1126 1 572 Ion Channels AT4G22200 72.193 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1126 K21867 - gmx:100798422 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1126 1 19475137 19481815 Apr1g1126 1 19475137 19481815 ECH