Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1086 ATGGGGGAAGAGTCGCCAAAGAATAAAGTCAAGTTCCTCTGCAGTCACGGCGGAAAGGTCCTTCCGCGACCCTCCGATGGAGTCCTCAAGTACGTCGGCGGAGAGACTCGCGTTGTTTCCGTGCCTCGTGACATCACCTTCTCTGAGCTCATGAAGAAGCTGAGTAGCATGTTCGACGGAGACATGGTGCTCAAGTACCAGCTGGTCCCGGAAGATCTGGACGCGTTGGTGTCGGTTAGAGCGGAGGAAGATCTGAAGCACATGATTGAGGAACACGATCGCCACCAAACAGGTTTGCTCCGTGCTTTCCTGTTTCCTCCAAAGCCAGTAGTAGTAGAAAACACGCCGCCAACAGAGGCTTATCTGTTGGAGCAGCGTTACATAGATGCCATTAATGGCATCGTACGAACGAGCTCAATAGGGAAGGGCTCTGCTTGTTCTACGCCTAAATCCACCTCTCCAGATGCTGCACCCAGTGCTGCAGAATCCCCATTCCTTGCTTCAGCTTCTTCTCGGCTTGCAATGCAAAGAGTGAGAAGCTCTCCTAGCCTAACAAACCTAAACGACCACACGCATCATCACCAGCACGCTCTTGGTTATACCTCTTCTACGTCTAGACCCCCACAAGATCCTCAAGCGGGGATTGGGCTGGGGAGGCCCATTCCCTTGGGCGGAAGTAGTAGTAGGGGTGCTGGGGGTTCCGCTTTTAACTATTATTACTCGCCCTCCCCCGCCAGACCCCACAACAAAGCCTATGCATACCAAGACGACACTGCCTATGGTGGCCATCTTATGGTCGAAAGAGTTCATAGCGTGCCTCGGAGTCCTATTAGGTCTATATGGGAGTAA 849 0.5277 MGEESPKNKVKFLCSHGGKVLPRPSDGVLKYVGGETRVVSVPRDITFSELMKKLSSMFDGDMVLKYQLVPEDLDALVSVRAEEDLKHMIEEHDRHQTGLLRAFLFPPKPVVVENTPPTEAYLLEQRYIDAINGIVRTSSIGKGSACSTPKSTSPDAAPSAAESPFLASASSRLAMQRVRSSPSLTNLNDHTHHHQHALGYTSSTSRPPQDPQAGIGLGRPIPLGGSSSRGAGGSAFNYYYSPSPARPHNKAYAYQDDTAYGGHLMVERVHSVPRSPIRSIWE* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1086 282 SUPERFAMILY CAD & PB1 domains 25 113 - -
Apr1g1086 282 Pfam PB1 domain 29 106 IPR000270 GO:0005515
Apr1g1086 282 PANTHER OS05G0427100 PROTEIN-RELATED 3 203 - -
Apr1g1086 282 MobiDBLite consensus disorder prediction 177 227 - -
Apr1g1086 282 MobiDBLite consensus disorder prediction 141 164 - -
Apr1g1086 282 Gene3D - 30 105 - -
Apr1g1086 282 SMART PB1_new 24 107 IPR000270 GO:0005515
Apr1g1086 282 PANTHER OS05G0427100 PROTEIN 3 203 - -
Apr1g1086 282 CDD PB1_UP2 13 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1086 Apr-Chr1 19044311 19045514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1086 9 169 MAP Kinase Kinase Kinase AT3G46920 40.230 2.40e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1086 - - gmx:100799918 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1086 1 19044311 19045514 Apr1g1086 1 19044311 19045514 ECH