Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr1g1081 | ATGGCTCTGATCCTGCATGCAACCAAAACTAACAAAAATGCTTACAAGACTCTGATCGCGGCAGAATATAGTGGAGTTCAAGTGGAATTGGCCCTAAATTTCGAGATGGGTGTCTCTAACAAAACTCCTCAATTTCTGAAAATGAATCCTCTCGGAAAGGTTCCCGTGTTGGAAACGCCCGATGGTCCCGTCTTTGAGAGCAATGCCATTGCTCGTTACGTTACCAGTTTGAAGGGTGACAACATTTTATACGGATCTTCTCCCATTGACCGTGCCCGCATTGACCAGTGGATTGATTTTTCTTCCACGGAGATTGATGGTCATGTTTTTTCTTTGTACCTACCAAGGCTTGGATTTGCCCCATACCTTCCTCCAGTTGAGGAGGCTGCAAATTCTGCGTTGAAGAGATCATTTGGGGCTTTGAACACTCATCTTGCTTCCAATACTTACCTGGTTGGCCATTCCGTAACCCTTGCTGACATCATAATGACGTGCAATTTGCATTTAGGTTTCACTAAGCTCTTAGTGAAGAGCTTCACCTCGGAGTTCCCTCATGTCGAGAGGTACTTTTGGACTTTGGTCAACCAGCCTAACTTCCGAAAGATATTAGGTCAGGTTAAGCAGACTGATGCTCTTCCTCCTATTCAATCCGCAAAGAAGCCTTCCCAGCCTAAGGAAACTAAGCCCAAGGCTAAGGATGAACCAAAGAAGGTGGCTAAAAAAGAGCCAGAAAAGCCCAAAGAAGAAGCAGCAGAAGAGGAGGCACCCAAGCCCAAGCCCAAGAATCCTCTTGATCTTCTTCCTCCAAGTAAGATGATCTTGGATGATTGGAAAAGGCTCTACTCAAACACTAAGACCAACTTCCGGGAGGTCGCAATCAAAGGATTTTGGGACATGTATGATTCGGAGGGATATTCACTCTGGTTCTGTGATTACAAATACAATGACGAGAACACCGTTTCCTTTGTGACATTGAACAAGGTTAGTGGATTTCTTCAGCGGATGGATCTGGCTCGCAAGTATGCATTTGGAAAGATGCTTGTTATTGGATCACAGCCGCCATTTAAGGTGAAGGGATTGTGGCTTTTCCGTGGGCAAGATATTCCGCAATTTGTGATTGATGAATGCTATGACATGGAGCTCTACGAATGGACAAAGGTTGACATCTCTGATGAAACTCAGAAAGAGCGTGTCAATCAGATGATTGAGGATTACGAACCATTTGAGGGAGAGCCTCTTTTGGATGCCAAGTGCTTTAAGTGA | 1263 | 0.4481 | MALILHATKTNKNAYKTLIAAEYSGVQVELALNFEMGVSNKTPQFLKMNPLGKVPVLETPDGPVFESNAIARYVTSLKGDNILYGSSPIDRARIDQWIDFSSTEIDGHVFSLYLPRLGFAPYLPPVEEAANSALKRSFGALNTHLASNTYLVGHSVTLADIIMTCNLHLGFTKLLVKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQTDALPPIQSAKKPSQPKETKPKAKDEPKKVAKKEPEKPKEEAAEEEAPKPKPKNPLDLLPPSKMILDDWKRLYSNTKTNFREVAIKGFWDMYDSEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLVIGSQPPFKVKGLWLFRGQDIPQFVIDECYDMELYEWTKVDISDETQKERVNQMIEDYEPFEGEPLLDAKCFK* | 421 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr1g1081 | 420 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 1 | 420 | IPR044628 | GO:0004364 | |
Apr1g1081 | 420 | MobiDBLite | consensus disorder prediction | 223 | 260 | - | - | |
Apr1g1081 | 420 | CDD | GST_N_EF1Bgamma | 5 | 77 | - | - | |
Apr1g1081 | 420 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 75 | IPR004045 | - | |
Apr1g1081 | 420 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 260 | 420 | IPR036433 | GO:0003746|GO:0006414 | |
Apr1g1081 | 420 | Gene3D | - | 80 | 213 | - | - | |
Apr1g1081 | 420 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 87 | 222 | IPR010987 | - | |
Apr1g1081 | 420 | SFLD | Main (cytGST) | 5 | 190 | - | - | |
Apr1g1081 | 420 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
Apr1g1081 | 420 | CDD | GST_C_EF1Bgamma_like | 90 | 210 | - | - | |
Apr1g1081 | 420 | SUPERFAMILY | GST C-terminal domain-like | 74 | 210 | IPR036282 | - | |
Apr1g1081 | 420 | SUPERFAMILY | eEF1-gamma domain | 260 | 420 | IPR036433 | GO:0003746|GO:0006414 | |
Apr1g1081 | 420 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 260 | 420 | IPR001662 | GO:0003746|GO:0006414 | |
Apr1g1081 | 420 | PANTHER | - | 1 | 420 | - | - | |
Apr1g1081 | 420 | SMART | EF1G_2 | 259 | 367 | IPR001662 | GO:0003746|GO:0006414 | |
Apr1g1081 | 420 | Gene3D | Glutaredoxin | 1 | 74 | - | - | |
Apr1g1081 | 420 | MobiDBLite | consensus disorder prediction | 210 | 267 | - | - | |
Apr1g1081 | 420 | Pfam | Glutathione S-transferase, C-terminal domain | 127 | 197 | IPR004046 | - | |
Apr1g1081 | 420 | Pfam | Elongation factor 1 gamma, conserved domain | 259 | 367 | IPR001662 | GO:0003746|GO:0006414 | |
Apr1g1081 | 420 | SFLD | Glutathione Transferase (cytosolic) | 5 | 190 | IPR040079 | - | |
Apr1g1081 | 420 | SUPERFAMILY | Thioredoxin-like | 2 | 81 | IPR036249 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr1g1081 | Apr-Chr1 | 18961902 | 18964326 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr1g1081 | 1 | 420 | Eukaryotic Initiation Factors Gene Family | AT1G57720 | 71.667 | 0.0 | 606 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr1g1081 | K03233 | - | gmx:100795680 | 699.893 |