Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1074 ATGGCTTCAATGTGTCAATGTGTGTCGCCTAAACCAAGTGAATGGGTGAAGGGGAAACTGGTTGGATCTGGATCTTTTGGCACTGTCCATTTGGCCATGAACAAATCCACTGGTGGACTTTTTGTTGTGAAATCAGCACATTCAGTGGCTGGACATGGGGCTTTAAAAAAAGAGGTCGAAATACTGAAGAGTTTGAATTCATCACCATATATTGTCCATTGTTTGGGGACAGAGGAGGATGAAGGCAACCTTAATGTTTTTATGGAGTATATGGCAGGGGGTAATTTGGCAGATGTGGCACACAAGTTTGGTGGGTCATTAGATGAAGATGTGGTTAGGGTGTATACCAGAGAAATTCTTCTCGGGTTAAAGCATCTTCATCAACATGGGATTGTGCATTGTGACCTTAAGTGCAAGAATGTGCTTTTGGGCTCATTTGGCAACATCAAGTTGGCAGATTTTGGATGTGCAAAACGGGTAAAGGAGTTAAGGGGTGGTGGAAATGTGGCAAATTCTTGGAAGTCTATTGGTGGGACTCCTCTATGGATGGCTCCTGAAGTATTGAGGAGTGGGATGCTGGAATTTGCTGCAGATATATGGTCTTTGGGATGTACAGTTATTGAGATGGCTACTGGCAGGCCTCCTTGGGCTAATGAGGTTTCAAATCCAATGTCTGCTGTGCTCAGGATTGCCCATGGCGATGACATACCTCAGTTTCCAACCCATTTCTCTCCAGAGGGTTTGGATTTCTTGGCCAGATGTTTGGATAGAGAGCCCAATAAAAGGTGCACCGTTGAGGAGTTACTTAGCCATCCATTTGTTTCATCAACTACATCTCCTAAAGAGTGTGCTTCCTCACCCGCAAGTGTCTTGGAGTTTCAAAACTTTGAGGATACATATGATTTAGATGAATTGGAATATTCAGAGGGGAATGATTTCTCATTCATAAACTCGTTCACATATCACAATGACCCAGAAGGAACATCAATATGTCAACTGGAAGACAGTGCATCAGAGTCATCAGGGAATTGGATTACTGTTAGATCAGGCTGA 1053 0.434 MASMCQCVSPKPSEWVKGKLVGSGSFGTVHLAMNKSTGGLFVVKSAHSVAGHGALKKEVEILKSLNSSPYIVHCLGTEEDEGNLNVFMEYMAGGNLADVAHKFGGSLDEDVVRVYTREILLGLKHLHQHGIVHCDLKCKNVLLGSFGNIKLADFGCAKRVKELRGGGNVANSWKSIGGTPLWMAPEVLRSGMLEFAADIWSLGCTVIEMATGRPPWANEVSNPMSAVLRIAHGDDIPQFPTHFSPEGLDFLARCLDREPNKRCTVEELLSHPFVSSTTSPKECASSPASVLEFQNFEDTYDLDELEYSEGNDFSFINSFTYHNDPEGTSICQLEDSASESSGNWITVRSG* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1074 350 SMART serkin_6 15 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1074 350 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Apr1g1074 350 Pfam Protein kinase domain 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1074 350 ProSiteProfiles Protein kinase domain profile. 15 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1074 350 CDD STKc_MAPKKK 14 274 - -
Apr1g1074 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Apr1g1074 350 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE 1 349 - -
Apr1g1074 350 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 349 - -
Apr1g1074 350 Gene3D Transferase(Phosphotransferase) domain 1 12 324 - -
Apr1g1074 350 SUPERFAMILY Protein kinase-like (PK-like) 13 299 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1074 Apr-Chr1 18919510 18920562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1074 14 275 MAP Kinase Kinase Kinase AT3G06030 45.221 5.42e-72 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Apr1g1074 Pkinase 9.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1074 K20716 - gmx:100798237 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1074 1 18919510 18920562 Apr1g1074 1 18919510 18920562 ECH