Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1056 ATGGATCTACTTTCTAATCCATGTTTCTTTGCTGCATTTTCTGCAGTTTTAACTCTTTTGATGGTTAAAGTTATGTTGAGAAGATTGCAGAAAAGGGAAAGAAAGAAGTACCATCCTGTTGCTGGTACCATATTTAATCAGATGCTGAACTTCAATAGGTTGCACCATTATATGACTGAACTTGCAGGCAAATACAAGACATACAGGTTGCTCAGTCCTTTCAGATATGAGGTTTACACTGCAGAACCATGTAATGTTGAGTATATACTCAAAACCAGATTTGAGAATTATGGAAAGGGGTTGTACAACTACAACAATTTGAAGGATTTACTAGGTGATGGTATTTTCACTGTTGATGGTGAGAAATGGCGTGAACAAAGGAAGATATCGAGTCATGAATTCTCCACCAAAATGTTAAGGGACTTCAGCATTTCAATATTCAGAAAGAATGCAGTAAAACTTGCAAACATAGTGTCTGAAGCTGCAACTTCTAATAGTACATTGGAAATCCAAGACCTTTTAATGAAATCAACTCTGGATTCAATTTTCCAAGTAGCATTTGGAACTGAACTTGACAGCATGTGTGGATCAAATCAAGAAGGGAAGATTTTTGCCGAGGCTTTTGATACTTCAAGTGCACTAACCCTTTATCGTTATGTAGATGTCTTCTGGAAGATAAAGAAATTTCTGAATATTGGATCAGAGGCCACGTTAAGAAAGAACACTGAAATTTTAAATGAATTTGTTTTTAAGCTGATCAACACTAGAATTCAACAAATAAAGATTTCAGAGGATGTTTCTACTAGTAAACGAGGAGATATTCTCTCAAGGTTTCTGCAAGAGAAAGAATATGATCCAATATACTTAAGAGATATAATTCTAAACTTTGTTATTGCTGGGAAAGACACAACAGCTGCCACACTTGCTTGGTTCTTGTACATGCTATGTAAGTATCCTGCAGTTCAAGAAAAAGCAGCAGAAGAAGTGAAAGAAGCAACTAAAACAAAAACAATTAGTAGCTATACTGAGTTTGTGTCCAGTCTCACGGACGAAGCTCTTGAAAAGATGAATTATCTCCATGCAGCAATTACAGAAACTCTCAGACTTTATCCTGCAGTTCCCGTGGATGCAAAGATTTGTTTTTCTGATGATACATTACCAGATGGATATAGTGTAAATAAAGGAGATATGGTAAGTTACCAACCATATGCTATGGGTCGGATGAAATTCATTTGGGGTGATGATGCAGAAGAGTTTACACCAGAAAGATGGCTTGATGAGAATGGCATTTTTAAGTCAGAGAACCCTTTCAAGTTTACAGCTTTTCAGGCTGGTCCTAGGATTTGTCTAGGAAAGGAGTTTGCTTATAGACAGATGAAGATATTCTCAGCAGTATTGTTAGGCTGTTTCCGCTTCAAATTGAATGATGAGAAGAAAAATGTCACTTACAAGACGATGATAAATCTTCATATTGATGGAGGTCTTGAAATCAAAACCTTCCACAGACAAGGGATTAGAAGATGA 1524 0.3642 MDLLSNPCFFAAFSAVLTLLMVKVMLRRLQKRERKKYHPVAGTIFNQMLNFNRLHHYMTELAGKYKTYRLLSPFRYEVYTAEPCNVEYILKTRFENYGKGLYNYNNLKDLLGDGIFTVDGEKWREQRKISSHEFSTKMLRDFSISIFRKNAVKLANIVSEAATSNSTLEIQDLLMKSTLDSIFQVAFGTELDSMCGSNQEGKIFAEAFDTSSALTLYRYVDVFWKIKKFLNIGSEATLRKNTEILNEFVFKLINTRIQQIKISEDVSTSKRGDILSRFLQEKEYDPIYLRDIILNFVIAGKDTTAATLAWFLYMLCKYPAVQEKAAEEVKEATKTKTISSYTEFVSSLTDEALEKMNYLHAAITETLRLYPAVPVDAKICFSDDTLPDGYSVNKGDMVSYQPYAMGRMKFIWGDDAEEFTPERWLDENGIFKSENPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFKLNDEKKNVTYKTMINLHIDGGLEIKTFHRQGIRR* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1056 507 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1056 507 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1056 507 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1056 507 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1056 507 Pfam Cytochrome P450 38 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1056 507 PANTHER CYTOCHROME P450 15 504 - -
Apr1g1056 507 PANTHER CYTOCHROME P450-RELATED 15 504 - -
Apr1g1056 507 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1056 507 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1056 507 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1056 507 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1056 507 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1056 507 SUPERFAMILY Cytochrome P450 36 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g1056 507 Gene3D Cytochrome P450 23 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1056 Apr-Chr1 18449656 18452779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1056 1 502 Cytochrome P450 AT2G45510 52.446 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1056 - - gmx:100789049 875.93