Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1052 ATGGAGTCCACGGTGGAAGCTTTGGAAAAAGATCTAAAGAATGTTAGAAAGTACTATGGGACTGGAAAAACGAAGGAAGCATCATGGAGACAATCACAGCTTAAAGGGTTGCGTAATTTTCTCGTGGAAAAAGAGGAAGAAATCTTGAAGGCCCTCAAGAAGGATTTGGGGAAGCATTATGTAGAGGCTTTCAGAGATGAGGTGGGAGCATTAATGAAGACCTTAAATTTGGCAACCAAGTCTTTGAAAAATTGGATGGCGGCCAAAGAGGCTAAACTTCCACGAATAGCACTGCTTTCCAGTGCAGAGATTGTTCCTGAGCCACTTGGTCTCGTTCTCATAATCTCATCATGGAATTTTCCTTTTGGACTGTCCTTAGAGCCACTAATAGGAGCAGTAGCTGCTGGAAACACACTAGTTCTAAAGCCTTCAGAGATGTCCCCTGCTTGCTCTTCTCTTCTAGCCACTGTCCTTCCAACTTACTTGGACAACAATGCCATTAGGATCATCCAAGGTGGACCTGAAATGGGCGAGCTACTCCTACAACAAAGATGGGACAAGATCTTCTTCACAGGAAGTGCACGGGTGGGGCGAATTGTTATGTCTGCAGCAGCGGTGCATTTGACACCTGTGACTTTGGAGTTGGGTGGAAAGTGCCCGGCATTGATGGATTCCCTTTCCTCTTCCTGGGACAGAGAGGTGGCTGTGAAACGAATTTTGGTGGCAAAATATGGGGCTTGTGCAGGGCAAGCATGCATAGCAATCGATTATGTTCTTGTAGAAAAGAGTTTCAGTTCTACGTTGGTGAACTTAATGAAGGTCGGGATTAAGAAAATGTTCGGAGAAAACCCCAAAGCATCCAACATAATTGCAAGGATAGTCAATGATAAACATTTCTCAAGACTTAGGAATCTTCTCTCTGATCCAAAGGTCAAAGAATCAGTGGTTTTTGGGGGTTCAATGGACGAAAAAGACTTATTTATCGAACCAACAATATTACTGGATCCACCTCTTGAATCAGCAATAATGGCAGAGGAAATTTTTGGCCCCGTGCTTCCTATTATCACGCTGGACAAGTTTGAAGACAGTATTGAATTCATAAACTCAAGACCTAAACCACTGGCAATCTATGCCTTCACAAAAAACCAAGCTTTGCAGAGAAGAATGCTATCTGAAACATCATCTGGAAGTCTTATATTCAACGATGCAATACTACAATACATAGCGGATACCCTACCATTTGGAGGAGTTGGTGAATGTGGATTTGGCAAGTACCATGGAAAGTTCTCCTTTGATGCGTTCAGTCACTATAAGGCTGTGGCTAGAAGAAGTTTCTTGACTGATTTTTGGTTCAGGTTTCCTCCATGGACTCTTGACAAGTTCCAACTACTTGAGGTAGCTTACAATTTAGACTATCTTGGAATAGTTCTAGTTCTGCTCGGCTTAAAGAGATCAAAACGGTCATTATTTCAGGCTTGTAATTGA 1485 0.4263 MESTVEALEKDLKNVRKYYGTGKTKEASWRQSQLKGLRNFLVEKEEEILKALKKDLGKHYVEAFRDEVGALMKTLNLATKSLKNWMAAKEAKLPRIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTLVLKPSEMSPACSSLLATVLPTYLDNNAIRIIQGGPEMGELLLQQRWDKIFFTGSARVGRIVMSAAAVHLTPVTLELGGKCPALMDSLSSSWDREVAVKRILVAKYGACAGQACIAIDYVLVEKSFSSTLVNLMKVGIKKMFGENPKASNIIARIVNDKHFSRLRNLLSDPKVKESVVFGGSMDEKDLFIEPTILLDPPLESAIMAEEIFGPVLPIITLDKFEDSIEFINSRPKPLAIYAFTKNQALQRRMLSETSSGSLIFNDAILQYIADTLPFGGVGECGFGKYHGKFSFDAFSHYKAVARRSFLTDFWFRFPPWTLDKFQLLEVAYNLDYLGIVLVLLGLKRSKRSLFQACN* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1052 494 PIRSF ALDH 1 475 IPR012394 GO:0006081
Apr1g1052 494 Pfam Aldehyde dehydrogenase family 4 440 IPR015590 GO:0016491
Apr1g1052 494 PANTHER ALDEHYDE DEHYDROGENASE 7 492 - -
Apr1g1052 494 PANTHER ALDEHYDE DEHYDROGENASE 7 492 IPR012394 GO:0006081
Apr1g1052 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Apr1g1052 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Apr1g1052 494 SUPERFAMILY ALDH-like 12 456 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1052 Apr-Chr1 18398643 18403972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1052 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 52.893 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1052 K00128 - gmx:100819197 874.774