Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1051 ATGGAACAGAGCATCCAATGCAAATACACTCTGCACCAAACCGTCACAAAAAAACTCGTAAAACCAAGAAAGCCCTCTGACTCCATTCAAAACCGTTCCATTTCCACAGTTTCAATATCCGTAACCGATCCATACGCCACTGACTCATCCAGCGACGAAGAAGAACTAAAGCACTTCCCTCGCCAGAGAGTGAAGCGCTATATCCACCGAATCAATTTTCAACCTGCAAGCAAAACCCTCACATCCAAAAAGAGACCCGCCGGAGAAACCATTTCCCGCCGCCCGCCGCCGAAGGTCTCTGTTTCCGGCGATTCTAGAAAGTACCGCGGCGTGCGGCAAAGACCATGGGGAAAATGGGCGGCGGAGATTCGAGATCCCACGAAACGTGTCCGTCTCTGGTTGGGAACCTTCGACACCGCCGAGGAAGCTGCCACGGTTTACGACAATGCCGCAATTAAACTTCGGGGCCCCAACGCGTTAACGAACTTCATCACGCCGCCGGCGAGAGAAAAGCCGGCGGAAGATGAAGTTTCCACTGGAAAACCGAAAATGAAAGTGGTTGTTAAATCAGAGGCGTCTGGCTCCGGCTACGACTCTGGAGATGAATGTCTCAACCTTTCTTCGCCTACTTCGGTTCTCCAATTCAACGAACCGCAAAAACCGGTTAATGCTGAACAGGTTAAGATTGAAGAGTGTGAAGGTGAGACAATGTGGTTTCACGAAACCAGTGAGTTTTTGCGACCTATTTGGGATGATGATGTGTTTAATTTTCCAACCACGCCAGAGTACTCGGTCATGTTTGAAGACCCTGTTTCACACATGTTTGACGAAACGACACCGGTTTTGTTTAGTGATGTTTCAAGTGATACTGTGAGTTTTGAGGAAAAGTACTCGCCATCAACGTTGTGCCAAGTGGACGATTATTTTCAAGATATTTTGTTAGGTTCAGATCCTCTTGTGGTGCTGTGA 969 0.483 MEQSIQCKYTLHQTVTKKLVKPRKPSDSIQNRSISTVSISVTDPYATDSSSDEEELKHFPRQRVKRYIHRINFQPASKTLTSKKRPAGETISRRPPPKVSVSGDSRKYRGVRQRPWGKWAAEIRDPTKRVRLWLGTFDTAEEAATVYDNAAIKLRGPNALTNFITPPAREKPAEDEVSTGKPKMKVVVKSEASGSGYDSGDECLNLSSPTSVLQFNEPQKPVNAEQVKIEECEGETMWFHETSEFLRPIWDDDVFNFPTTPEYSVMFEDPVSHMFDETTPVLFSDVSSDTVSFEEKYSPSTLCQVDDYFQDILLGSDPLVVL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1051 322 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF4-LIKE 5 219 - -
Apr1g1051 322 MobiDBLite consensus disorder prediction 163 182 - -
Apr1g1051 322 CDD AP2 107 163 IPR001471 GO:0003700|GO:0006355
Apr1g1051 322 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 219 - -
Apr1g1051 322 Pfam AP2 domain 107 156 IPR001471 GO:0003700|GO:0006355
Apr1g1051 322 SUPERFAMILY DNA-binding domain 107 163 IPR016177 GO:0003677
Apr1g1051 322 Gene3D AP2/ERF domain 106 165 IPR036955 GO:0003700|GO:0006355
Apr1g1051 322 PRINTS Ethylene responsive element binding protein signature 108 119 IPR001471 GO:0003700|GO:0006355
Apr1g1051 322 PRINTS Ethylene responsive element binding protein signature 130 146 IPR001471 GO:0003700|GO:0006355
Apr1g1051 322 MobiDBLite consensus disorder prediction 75 107 - -
Apr1g1051 322 ProSiteProfiles AP2/ERF domain profile. 107 164 IPR001471 GO:0003700|GO:0006355
Apr1g1051 322 SMART rav1_2 107 170 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1051 Apr-Chr1 18337045 18338013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1051 7 321 AP2-EREBP Transcription Factor Family AT4G27950 41.399 6.75e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr1g1051 AP2 7.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1051 - - pvu:PHAVU_008G159400g 335.109