Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1036 ATGAAGAACCCAAAACGCCACTCGCCGCCCGTTAAATCTTTCCGGCGAGTGGACCTTGATTCCGGCCAGATGCTCGCCAGGTTGGAGAATACTAACCGGAGAAGGCTCAAAATCCGGCGAATGAAGTACACTTGCCAGGCGAAGATACGCGTCGGGAATGGCGCCACCGGCGTTTCCCCGGAGGAGGCGAAAGTCGTCGATTCGGAGGGAGAGAGAAGGGAGATTCACAAGCATGTGGAAATATCTCTTTCGCTGGCGTCGTCGTCATCGGAGGAGGAGGACCGGTGGCCGTTGAAACGAAACGACGACGTTTTGTCGTACGGGTCGGTGTCGGTGATAGGGAACAGGAAGGAGATGGAGGACGCGGTGAGCGTGGAGATAGGGTTTGTGACGAAGGAGAGAGAGAAGTGTGACTTCTTCGCAGTGTACGACGGTCACGGCGGAGCTCAGGTGGCGGAGGCGTGCCGGGAACGGTTACACCGGCTGGTGGCGGAGGAGGTCGAGAGGAGTGTGGAATGGGACTGGGAGAGAGTGATGGAAGGGTGTTTTCGAAAAATGGATAGTGAGGTGGCCGATAATGCGGCAGTCAGGACGGTGGGTTCCACGGCGGTTGTGGCCGTTGTAGCAGCGGTGGATATTGTCGTCGCCAATTGCGGCGATTGTAGAGCCGTGATGGGAAGAGGAGGGGAAGCCGTGAACTTATCTCGTGATCATAAGCCCGACAGGCCTGATGAGTTGATGCGAATTGAAGAGGCTGGTGGAAGGGTCATAAACTGGAATGGCCAGCGCGTGTTTGGTGTTCTTGCCACTTCGCGATCCATAGGAGATCAGTACCTTCGGCCATATGTAATATCGAAGCCAGAAGTGATGGTGACCAAACGTAGCAAGCAGGATGAGTTTCTGATACTAGCAAGTGATGGGTTGTGGGATGTGATCTCAAGCGAAGTTGCATGCCAAGTTGTGAGGAAATGCCTCAAGGGGCAGATAAGGAGAGTGTGCAATGGGATTGGGAATCATCAAAGCCGTGCAGCTGAGGCTGCAAGACTCTTGGCTGATATAGCATTGGCAAAGGGAAGCAGAGATAACACCAGTGTCGTAGTAGTCGAGCTTAGAGGAACAGTAGCTACTGGTTGA 1134 0.5432 MKNPKRHSPPVKSFRRVDLDSGQMLARLENTNRRRLKIRRMKYTCQAKIRVGNGATGVSPEEAKVVDSEGERREIHKHVEISLSLASSSSEEEDRWPLKRNDDVLSYGSVSVIGNRKEMEDAVSVEIGFVTKEREKCDFFAVYDGHGGAQVAEACRERLHRLVAEEVERSVEWDWERVMEGCFRKMDSEVADNAAVRTVGSTAVVAVVAAVDIVVANCGDCRAVMGRGGEAVNLSRDHKPDRPDELMRIEEAGGRVINWNGQRVFGVLATSRSIGDQYLRPYVISKPEVMVTKRSKQDEFLILASDGLWDVISSEVACQVVRKCLKGQIRRVCNGIGNHQSRAAEAARLLADIALAKGSRDNTSVVVVELRGTVATG* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1036 377 CDD PP2Cc 106 370 IPR001932 -
Apr1g1036 377 PANTHER PROTEIN PHOSPHATASE 2C 51-RELATED 76 375 - -
Apr1g1036 377 PANTHER ALPHABET, ISOFORM E-RELATED 76 375 - -
Apr1g1036 377 SUPERFAMILY PP2C-like 104 371 IPR036457 -
Apr1g1036 377 Pfam Protein phosphatase 2C 107 363 IPR001932 -
Apr1g1036 377 ProSiteProfiles PPM-type phosphatase domain profile. 106 370 IPR001932 -
Apr1g1036 377 Gene3D - 98 373 IPR036457 -
Apr1g1036 377 SMART PP2C_4 94 368 IPR001932 -
Apr1g1036 377 ProSitePatterns PPM-type phosphatase domain signature. 139 147 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1036 Apr-Chr1 17766965 17770163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1036 100 371 PP2C-type Phosphatase Gene Family AT2G29380 51.701 1.68e-86 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1036 K14497 - gmx:100807235 548.125