Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1035 ATGTTGAACTTCCAAAAGTTTTCTCTATTGTTGACGGTGTTGTTTCTGCTGTGGAATCCTGTAATAGGCAAGAATGGGTGCACGGATAAGTGTGGAGGCGTTCATATTCAGTTTCCATTTTACCTTAAAACAACCAAATTGGTTCGCACCACAGACTATCCTCTTGGGTTTGATTTGTTATGCACTGATGCGGATGAGACTGTGCTGGAGCTCCCTTCCGTTCCAATTAAATTATTTGTCAAAAACATTGATTACAAGTCACAGCAAATCCAAATCTACGACCCTCAAAATTGCCTTCCCAAAGAGCTCATGAAACTCGGTAATTCATCTATTTCGCCGTTTAAATTCCAATCACTTGGTGCTGGTGCTGACAAGCAAAACGTTTCCTTCTTCCGCTGCAACTCAAAGTCATGCCCCATTTTGCAACTCGGATTTGATGACGACTTTGTTGATCCTGAAATACTTTCATGCACAAAGGTGAGTGATGTTTTGTCCGTCCAGTGGCGCGTGGGGGATTTGATGGATGACTTGAGCAACATTGTGGTTATGGAATGGTCCAACCCCGATTGCAGATCCTGTGCAGCACAAGAGCATAAATGTAAATATAAGAATGGTACCCAAAATGAAACTGAATGTTTCATTTGCCCAACAAATATAATTCCAAAGTCGACTATTATACTAATTGTTTCAGGGGGAATAGTTGGTTTGGTGCTTTTGCTGCTGCTAGTGAAGGCATTGTTTCATGTGTATGGCTTTTATAAGATGAAAGGAGAAGACCAAGCTAGGATAGAAAAATTCTTGGAGGATTATAGAGCAATGAAGCCCACGAGATTCACTTATGCTGACATTAAGAGAATCACGAATGGGTTTAGTGAAAGTTTAGGAGAAGGAGCTCACGGAGCCGTGTTCAAAGGAATGCTCTCCCGAGAAATTCTCGTTGCTGTGAAGATACTCAACGATGTAGAGGGAGATGGGAAGGATTTCATAAATGAAGTTGGAACAATGGGCAAAATTCATCATGTTAACGTTGTTCGCTTGCTTGGATTTTGCGCGGATGGATTCCACCGTGCTCTTGTCTATGATCTTTTCCCAAATGGGTCACTACAAAGATTCTTGGCTCCACCAGACAACAAGGATGTTTTTCTAGGGTGGGAGAAGTTGCAACAGATTGCACTTGGTGTTGCCAGAGGGATTGAGTATCTGCATCTTGGTTGCGATCATAGAATTCTTCACTTTGACATTAATCCCCACAATGTGTTACTAGATGATCACTACATGCCAAAAATTACTGATTTTGGACTAGCCAAGTTGTGTCCCAAAAATCAGAGCACAGTGTCTATGACTGCAGCCAGGGGAACCTTGGGGTACATTGCCCCTGAAGTTTTCTCAAGAAATTTTGGCAATGTTTCTTACAAGGCAGACATATATAGCTATGGAATGTTGTTGCTTGAGATGGTAGGAGGAAGAAAGAATACCAATGTGTCAGCTGAGGAAAGTTTCCAAGTTCTGTACCCTGAATGGATTCATAATTTGCTTGAAGGCAAAGACGTGCAAGTTAGTATTGAAGACGAGGGAGATGTTAAAATTGCAAAGAAACTTGCCATTGTAGGACTTTGGTGCATTCAGTGGAACCCAGTGGACCGTCCATCCATGAAAACTGTGGTGCAAATGCTTGAAGGAGATGGAGACAAGTTAATTGCACCCGCTACGCCTTTTGACACTGCCGGTTCTTCTAGAACAAATGCTGCTGTTCCAGCACGACACCAGAATTTCGAATTGGAAATTATTCATGAACTAGTGTAA 1803 0.4199 MLNFQKFSLLLTVLFLLWNPVIGKNGCTDKCGGVHIQFPFYLKTTKLVRTTDYPLGFDLLCTDADETVLELPSVPIKLFVKNIDYKSQQIQIYDPQNCLPKELMKLGNSSISPFKFQSLGAGADKQNVSFFRCNSKSCPILQLGFDDDFVDPEILSCTKVSDVLSVQWRVGDLMDDLSNIVVMEWSNPDCRSCAAQEHKCKYKNGTQNETECFICPTNIIPKSTIILIVSGGIVGLVLLLLLVKALFHVYGFYKMKGEDQARIEKFLEDYRAMKPTRFTYADIKRITNGFSESLGEGAHGAVFKGMLSREILVAVKILNDVEGDGKDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDLFPNGSLQRFLAPPDNKDVFLGWEKLQQIALGVARGIEYLHLGCDHRILHFDINPHNVLLDDHYMPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKADIYSYGMLLLEMVGGRKNTNVSAEESFQVLYPEWIHNLLEGKDVQVSIEDEGDVKIAKKLAIVGLWCIQWNPVDRPSMKTVVQMLEGDGDKLIAPATPFDTAGSSRTNAAVPARHQNFELEIIHELV* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1035 600 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
Apr1g1035 600 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Apr1g1035 600 ProSiteProfiles Protein kinase domain profile. 288 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1035 600 PANTHER RUST RESISTANCE KINASE LR10-RELATED 39 599 IPR045874 GO:0004672
Apr1g1035 600 Pfam Protein kinase domain 292 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1035 600 Gene3D Transferase(Phosphotransferase) domain 1 363 566 - -
Apr1g1035 600 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 39 599 - -
Apr1g1035 600 Gene3D Phosphorylase Kinase; domain 1 262 362 - -
Apr1g1035 600 SUPERFAMILY Protein kinase-like (PK-like) 270 559 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1035 Apr-Chr1 17727249 17729523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1035 187 571 Receptor kinase-like Gene Family AT1G66910 41.220 5.21e-103 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr1g1035 Pkinase 7.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1035 - - gmx:100819302 984.556