Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1033 ATGGGAAAGGAAGGGTGGTACCTCAGTTGTTCCTGTGCTCATAGCCTTGTGTTAATATTTGCCACAATCCTTCTCCTATTCCAACAAAATTGCACCGCTAAGAACAATCCACCATGTCCTCCTTCATCATGCGGCAAAATTGGTAACATTTCTTACCCATTTCGACTCAGAGGCGAGCCAAGCCACTGCGGCGACCCAAGGTACCAATTAGATTGCGTGAACAACGCGACACTGTTAACTTTGTTCTCAGGGAAATACCATGTACAAGACATCGATTACAAGAGATATAAAATGGTAGTTAGTGATGCGGGTGCAGGGGAGGACGCCACTTGTTCCTTCATCCCTCGCTATTTTTTGTCCGATGGCAGTTTCAGGCCCACGGGCCTCGTTGGCCCAGATGATTTTGGATCACAGCCTTTTCTTTTGGACCCCATAGATCCTCCGAGAATAGCCTACTTCAACTGTACCAATCCAGTGACTGGTGATCCTCGTTATGTTAAGGTGGATACGAGTGGTTGTGGCTCGCGAGGGCATGTCTATGCTCTTTTGGAACCATCATTGTTTGATTACCGTGTGAAGGACATCAAGGTTGGGTGCAATCTTACGGTGGCTACCTTGGGAAGTTCGAGGAAGCTTCCGGAGACACAACAGGGGAACGTTTCCTATGATGAGATTCATAGGATAATTGTGGAGGGGTTTCAGTTGTCGTGGTTGCCTGTTATTTGTGAAGATCGATGTGGAAAAGGGACCAATTGCGAGGTTATCAATGAATCCAACGGACAAGTCCAATGTAACAAGCACTACTGTCACTATGCCTACCACACCACCGATAAGTGCGAATATTGGCAACAGATTATTGGCTATACTCGAGCTTATCTTAGAGGCATTATATTTGGAATAGGCAGCAGAATAACATTTAGCACGAAACAATTGGACAACCCTGTTGGACTAGAATATTTTGATGGAGGAATATTCATAGGACGAAATGTTGTACCAATATTTGTGGCTGCTAGATATCTGTTTGGAATTGTACTTCTCCTTGTTTTGTTAATCTACAAGTGGCGTCGAAGACATTTATCAATATATGAAAATATAGAGATTTTTTTGCTAGACAGCAGTCTAAATCCCATTAGGTATGAATACAAAGAAATAAAAAAAATGACTGGAGGTTTCAAAGTAAAACTGGGTGAAGGAGGCTTTGGCTCTGTGTACAAAGGAAAACTTCGAAGTGGGTTGGATGTAGCAGTGAAGATGTTGTTGAGCAAATCCAATGCTAATGGACAGGATTTTATAAGTGAAGTAGCTACCATTGGAAGAATACATCACGTGAATGTGGTACGTCTTGTTGGATATTGTGTTGATGGAAAAAAACGTGCTCTAGTTTATGAATTCATGCTTAATGGGTCATTGGATAAATATATTTTTTCTAAAGAAGGAAGTGACCCTTTAAGTTACGAGAAAATATATGAAATATCTGTTGGAATAGCTCGTGGGATTGCATATATACACCAAGGTTGTGATATGCAAATTCTACATTTTGATATCAAGCCTCATAATATACTTCTAGATGACAACTTCATTCCAAAGGTTTCAGATTTTGGACTAGCAAAGTTATATCCTGTGGATGATAGCATTGTCCCCTTAACTGCAGCAAGAGGAACTTTGGGTTACATGGCTCCGGAATTATTCTACAAAAATATGGGTGGAGTATCGTATAAGGCTGATGTCTATAGCTTTGGAATGCTTTTGATGGAAATGGCAAGTAAGAGAAGGAACACAAATCCTCATGCAGAGCATTCAAGCCAACATTACTTCCCCTTTTGGATCTATGATCAGTTTAAAGAAGAGAAAAATATTGATATGGTAGATGCCTCGGAAGAAGACAATATTCTAGCAAAAAAGATGTTCATGGTTGCACTTTGGTGTATTCAGTTAAAACCAAGTGATCGTCCTTCAATGAATAAGGTGGTGGAAATGCTTGAAGGGGAAATTGAAAGCCTTGAATTGCCTCAAAGGCCTTCTTTTTATCCAGATAATATCTATGTACATGATGAACTCAACTCTGGGCAAACATCATTTAGTAGTTCCAGTTATTCTGATAGTTATCATGATGAAAGCATAACTGGTGATTCACCAAGAATAGTACTTGACAGAGATAGGCAATCTATCTCGAATTAA 2178 0.4031 MGKEGWYLSCSCAHSLVLIFATILLLFQQNCTAKNNPPCPPSSCGKIGNISYPFRLRGEPSHCGDPRYQLDCVNNATLLTLFSGKYHVQDIDYKRYKMVVSDAGAGEDATCSFIPRYFLSDGSFRPTGLVGPDDFGSQPFLLDPIDPPRIAYFNCTNPVTGDPRYVKVDTSGCGSRGHVYALLEPSLFDYRVKDIKVGCNLTVATLGSSRKLPETQQGNVSYDEIHRIIVEGFQLSWLPVICEDRCGKGTNCEVINESNGQVQCNKHYCHYAYHTTDKCEYWQQIIGYTRAYLRGIIFGIGSRITFSTKQLDNPVGLEYFDGGIFIGRNVVPIFVAARYLFGIVLLLVLLIYKWRRRHLSIYENIEIFLLDSSLNPIRYEYKEIKKMTGGFKVKLGEGGFGSVYKGKLRSGLDVAVKMLLSKSNANGQDFISEVATIGRIHHVNVVRLVGYCVDGKKRALVYEFMLNGSLDKYIFSKEGSDPLSYEKIYEISVGIARGIAYIHQGCDMQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPVDDSIVPLTAARGTLGYMAPELFYKNMGGVSYKADVYSFGMLLMEMASKRRNTNPHAEHSSQHYFPFWIYDQFKEEKNIDMVDASEEDNILAKKMFMVALWCIQLKPSDRPSMNKVVEMLEGEIESLELPQRPSFYPDNIYVHDELNSGQTSFSSSSYSDSYHDESITGDSPRIVLDRDRQSISN* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1033 725 MobiDBLite consensus disorder prediction 692 711 - -
Apr1g1033 725 Gene3D Transferase(Phosphotransferase) domain 1 465 676 - -
Apr1g1033 725 ProSiteProfiles Protein kinase domain profile. 389 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1033 725 SUPERFAMILY Protein kinase-like (PK-like) 373 661 IPR011009 -
Apr1g1033 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Apr1g1033 725 SMART serkin_6 389 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1033 725 ProSitePatterns Protein kinases ATP-binding region signature. 395 417 IPR017441 GO:0005524
Apr1g1033 725 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 13 692 - -
Apr1g1033 725 CDD STKc_IRAK 395 662 - -
Apr1g1033 725 Pfam Wall-associated receptor kinase galacturonan-binding 39 102 IPR025287 GO:0030247
Apr1g1033 725 Pfam Protein tyrosine and serine/threonine kinase 392 660 IPR001245 GO:0004672|GO:0006468
Apr1g1033 725 Gene3D Phosphorylase Kinase; domain 1 373 464 - -
Apr1g1033 725 PANTHER RUST RESISTANCE KINASE LR10-RELATED 13 692 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1033 Apr-Chr1 17713676 17717426 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1033 8 673 Receptor kinase-like Gene Family AT1G66910 33.476 1.80e-100 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr1g1033 PK_Tyr_Ser-Thr 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1033 - - gmx:100820366 1108.98