Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1032 ATGCCGATTAGGTACTCTTACAAAAAAATAAAGCATATGACTAAGAGTTTCAAAGAAAAGTTGGGTCAAGGAGGATTTGGCGAGGTGTATAAAGGAAAGTTAAGGAGTGGATTATTTGTAGCGGTTAAAATGTTGAGAAAATCAAAGGCTAATGGACAAGAATTCATTAGTGAAGTTGCAACTATAGGAAGAATACACCATAACAATGTTGTGCGACTTATTGGATTTAGTGTTGAAGCATCAACCTGTGCTCTAATTTATGAGTTCATGTCTAATGGTTCTCTTGATAAATATATTTTCTCTAAGACAAATGATATCTCTTTAACTTATAAGCAAATTTATGAGATATCTTTTGGAGTAGCTCGTGGTATTGCTTATTTACATCAAGGCTGTGACAGGCAAATTTTGCATTTTGACATCAAACCACATAACATCCTTCTTGATGAGAACTTTATACCAAAAATTTCTGACTTTGGCCTTGCAAAGCTTTACCCTATAAACAAAAGCATTGTCACTTTAACTGCAGCTCGGGGAACAATTGGATACATGGCTCCTGAGTTATTCTACCACAATATTGGAGGAATATCATATAAGGCTGATGTTTATAGCTTTGGTATGCTTTTGATGGAAATGGCAAGCAAAAGAAAAAACTTGAATAAACATGCAGAAAATTCAAGTGAACTTTTCTTTCCCTTGTGGATATATGATCAACTGAATGGAGAAGTTGAGATACAAATAGAAGATATTACTAAGGAGGCAAATAACGAGGTAAAGAAGATGTTCTTAGTTGCATTATGGTGTATACAGTTAAAACCATGTGATCGTCCTTCAATGAACAAAGTAGTAGAAATGTTAGAAGGAGAACTCGAGAACATTGAAATGCCTCCAAAACCTTCTCTATATCCACATGAAATGATTCAAGAGAATCTAGGAAATAGCTCAAGCCAAACTTTATCAGATGATTCTAATGGCTCTACAAGTTATCTTGAAGAAAAAAGTATGTACTATTCATAA 1014 0.3402 MPIRYSYKKIKHMTKSFKEKLGQGGFGEVYKGKLRSGLFVAVKMLRKSKANGQEFISEVATIGRIHHNNVVRLIGFSVEASTCALIYEFMSNGSLDKYIFSKTNDISLTYKQIYEISFGVARGIAYLHQGCDRQILHFDIKPHNILLDENFIPKISDFGLAKLYPINKSIVTLTAARGTIGYMAPELFYHNIGGISYKADVYSFGMLLMEMASKRKNLNKHAENSSELFFPLWIYDQLNGEVEIQIEDITKEANNEVKKMFLVALWCIQLKPCDRPSMNKVVEMLEGELENIEMPPKPSLYPHEMIQENLGNSSSQTLSDDSNGSTSYLEEKSMYYS* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1032 337 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 315 IPR045874 GO:0004672
Apr1g1032 337 ProSiteProfiles Protein kinase domain profile. 15 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1032 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Apr1g1032 337 MobiDBLite consensus disorder prediction 311 337 - -
Apr1g1032 337 SMART serkin_6 15 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1032 337 ProSitePatterns Protein kinases ATP-binding region signature. 21 43 IPR017441 GO:0005524
Apr1g1032 337 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Apr1g1032 337 Gene3D Transferase(Phosphotransferase) domain 1 90 295 - -
Apr1g1032 337 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 2 315 - -
Apr1g1032 337 Pfam Protein kinase domain 18 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g1032 337 PIRSF ILK 5 295 - -
Apr1g1032 337 SUPERFAMILY Protein kinase-like (PK-like) 4 286 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1032 Apr-Chr1 17701736 17703416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1032 4 317 Receptor kinase-like Gene Family AT4G18250 50.464 8.92e-105 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr1g1032 Pkinase 5.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1032 - - cam:101508554 509.22