Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1024 ATGTTTGCAGAGACAGGTCTTCTCTTCCCTTATTTGCAGAACTTCTCTCAAGAGCTTCAACAACTTGAGGAGTCCTGCATGACCCACAAGTCCAATGCTTCAATGAGTGACCTTGTCCAATCTTCTGCAATCTCAGAGTATGATTTGTTACTAGAGGGAGATCTGTTCAAAGCACCTGAACCTATTATCGAAGAACCAGCAATAGACCTTGATCCTGTGCAAGCAGCCATCTCAATGATATCTTGTGCGGACGATGTCTCCTCCCAGGGTCTAAAATCCTCAGATATTGATGTGCTTCAAAATGAACAATTTCTGAGTGAGGTATTCTATGAGTGCAAAAAGGACCTCTTAGAAAAGACAGTGATAGAGTCACCGCGCTCTGATATTATGGAAATCAATGTTCCATCTCTGAACATTGATGATAATTCAATTCAAGAAAACAAACCTCTTCCTCACATGACATTACCAAAGAGTGTCAGTTCAGGAAATCTGAGTTCAATAGACTGGATGAATGGAGCAGCAATGAAGCCTGCTTTCCTTGATTTTCCGGGAATTGATTTCAGTTCAGTTTATGGCATGCGGAGAGCATTTAGCGAAGGAGATATCAAGACTCTTGGTAATGGCCACATGAACACTGGCCAATCTCCCCTGGAGAGGCCTTTTCTACTCAGCAACTGCACTAGTGAGGAACGTCAAGAAAAGCTCTCCAGATATAGGAATAAGAAGACAAAGAGAAATTTCGGGAGAAAAATTAAGTATGCTTGCAGGAAGGCACTTGCTGACAGCCAACCGAGAATCCGTGGAAGATTTGCAAAGACAGAAAATTAG 828 0.4227 MFAETGLLFPYLQNFSQELQQLEESCMTHKSNASMSDLVQSSAISEYDLLLEGDLFKAPEPIIEEPAIDLDPVQAAISMISCADDVSSQGLKSSDIDVLQNEQFLSEVFYECKKDLLEKTVIESPRSDIMEINVPSLNIDDNSIQENKPLPHMTLPKSVSSGNLSSIDWMNGAAMKPAFLDFPGIDFSSVYGMRRAFSEGDIKTLGNGHMNTGQSPLERPFLLSNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEN* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1024 275 PANTHER CCT MOTIF FAMILY PROTEIN 26 275 - -
Apr1g1024 275 Coils Coil 12 32 - -
Apr1g1024 275 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Apr1g1024 275 Pfam CCT motif 231 273 IPR010402 GO:0005515
Apr1g1024 275 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 26 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1024 Apr-Chr1 17468973 17472964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1024 227 272 C2C2-CO-like Transcription Factor Family AT5G24930 54.348 5.52e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr1g1024 CCT 1.7e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1024 - - gmx:100814332 433.335