Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1001 ATGGGAACTTCTGCAAACGACGTCGCCTGTGACCAAAGCGCCATCGTCCACAAAGGCGTCGACTATGCTCAGTACTTCTGCACCTATGCTTTCTTATACCATCAGAAGGAGATGCTCTCCGATCGCGTTCGCATGGACGCATACTTCAATGCTATTTTTGAAAACAAATGTCACTTCACTGGCAAGACTGTGTTGGATGTGGGTACTGGAAGTGGAATTCTTGCTATATGGTCAGCACAAGCAGGTGCTAGGAAGGTTTATGCAGTGGAAGCTACTAAGATGTCTGAACACGCACGTGCGCTTGTCAAAGCGAATAATCTCCACCACGTGGTTGAGGTCATTGAAGGATCGATGGAGGAAGTTACCCTGCCAGAGAAAGTTGACGTGATCATCTCTGAGTGGATGGGTTATTTTCTCCTACGTGAATCTATGTTTGATTCAGTTATACATGCTCGTGACCGCTGGCTCAAACCTACAGGAGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCTATCAGGACTGGAATGGGAGATCACAAAATGGATGATTACCAGTCAGCTATGGACGATTGGCACAACTTTGTTGATGAAACAAAAGCCTTTTATGGTGTTGATATGAGCATTTTAACGAAGCCTTTTTCAGTGGAGCAGAAGAAATACTATCTACAGACATCATTGTGGAGCAACCTTCATACACATCAAGTCATAGGAACTGCTGCTATAATAAAGGAAATTGATTGTTTAACTGCCACAGTGACTGACATAGAGAAAGTTAGATCAAAATTTTCTTTGTCAATAACCATGGACACCGCAAAATTGTGTGGATTTGGCGGGTGGTTTGATGTACATTTTCGGGGAAGATGTGAGGATCCAGCTGAACATGAGATTGAGTTAACTACAGCTCCTAGTGTAGATTATGGTACACATTGGGGCCAACAGGTTTTTCTCTTGCATTCTCCTACACATGTGAGTGAAGGTGATGATTTAAGGGTTTCTTTTCTAATGAATCGTTCAAAGGAAAATCATCGTTTAATGGAGGTTGAGCTTGGGTGTGAGATTCAACAGCATTCTGGCAAGCTTCTTGTGCCTTTAAAAAATAAGTACTACATTGAATGA 1122 0.4287 MGTSANDVACDQSAIVHKGVDYAQYFCTYAFLYHQKEMLSDRVRMDAYFNAIFENKCHFTGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLHHVVEVIEGSMEEVTLPEKVDVIISEWMGYFLLRESMFDSVIHARDRWLKPTGVMYPSHARMWMAPIRTGMGDHKMDDYQSAMDDWHNFVDETKAFYGVDMSILTKPFSVEQKKYYLQTSLWSNLHTHQVIGTAAIIKEIDCLTATVTDIEKVRSKFSLSITMDTAKLCGFGGWFDVHFRGRCEDPAEHEIELTTAPSVDYGTHWGQQVFLLHSPTHVSEGDDLRVSFLMNRSKENHRLMEVELGCEIQQHSGKLLVPLKNKYYIE* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1001 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 357 IPR029063 -
Apr1g1001 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 12 360 - -
Apr1g1001 373 CDD AdoMet_MTases 63 163 - -
Apr1g1001 373 Gene3D - 166 373 - -
Apr1g1001 373 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Apr1g1001 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 12 360 IPR025799 GO:0016274|GO:0018216
Apr1g1001 373 Gene3D Vaccinia Virus protein VP39 20 164 IPR029063 -
Apr1g1001 373 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 350 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1001 Apr-Chr1 15702111 15720935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1001 2 332 C2H2 Transcription Factor Family AT3G12270 32.486 5.32e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1001 K11434 - gmx:100790625 665.611