Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0995 ATGGCGTTGGTAGCAGCATCACGAAAGGTGGGTATGCGTATGCGTATGCTGGGAGACAGTTACAGTTTCAGTTTCTCAACTGAATCACAATCCCATTACAGGAAGCAGATTTCACTCGCAAATCTCTTCAAAAAGTACGGTTTCCCCTCTTCCCTTCTTCCCTCCTTTCTCTCTCAGAACCCCTCCCTCTTCCATTCCCCTCTTCCGCAGCTCAACAAATCGCTCGCCACTCTCTTTTCCCTCCGAATTCCCCAAAACGCTATCGTTTCACTCCTCCGCGATTGCCCCTCCATCTTGGACTGCACCTTCCTCAATAACTTCCAATCGCGTCTCCCCGAATTCAAATCTCGCTTCCCCAATCCTTCCCCTTCCACGCTCGTTAATCTTTTGCATTGTTCTAGAAGGTTCCACCTCGACCCCCTTCATCTTTCTCACAAACTTGACTCTTTTATGGGTTTAGGCTTTTCCCAGGCTACCGTGGTTAGGGTTTTGGAGGGGTTCCCTTCTGGCCTCGTGACGAGCGGCGGTGAAGCCGTGCGTGTCGTTGAATTTCTTGTCGAATTCGGGGTTCCCAGGGATGAGATTGATCGTGTTGTTGGGCTGTTCCCTAGGGTTTTGGGACTTGGGGTTGAAGATAGGTTGAAGCCCTTGATTTGTGAGTTGAGAGGTTTGGGATTTTCCGGGCGTGAAATTAGGAAAGAGATCGTGAGGGATCCGAGGATCCTGGGAATGGAAATTGGGGAATTCTCGCGGTGTTTGCGGTTGTTAGAGACTTTGAAGTGCAGAGAAGCGATAAAAGAGAGGGCTTTGGGGGAGCGTTTGATGAGGGCCTGTTTTGAGGTGAAATTGAGAGTGGATTGTTTGTGTGGTCATGGTTTGACTCGAAGAGATGCATTTAAGGTGTTGTGGAAAGAACCGAGGGTGATCACTTATGATGTGGGAGATATTGAGAAGAAGATTGAGTTTTTGATGCATAGGATGAAATTTAGTGTGGATTGTTTGCTTGATGCTCCTGAATACTTGGGTGTGAATTTTGAGAAGCAGATTGTTCCCAGGTACAACGTGGTCGAGTATTTGGAGGCAAAAGGTGCCATTGGTTTTGAGGTTGGGTTGAAGGACCTTATCAAGCCCTCTAGGCTTAGGTTTTACAATCTTTATGTCAAGCCTTACCCAGAGTGTGAAAAAATATATGGGAGATTTTCAGGGGATCTTCAAGTTAAAAGGAAGCATCCTCTTGGACTGTGGAAGCTCTTTAAACCGCACAAGTTTCCGGAGTCTGATGAAGATGTGAGGAACATGAAGTGCTTCATGGACTCACTGGTGTAA 1326 0.4713 MALVAASRKVGMRMRMLGDSYSFSFSTESQSHYRKQISLANLFKKYGFPSSLLPSFLSQNPSLFHSPLPQLNKSLATLFSLRIPQNAIVSLLRDCPSILDCTFLNNFQSRLPEFKSRFPNPSPSTLVNLLHCSRRFHLDPLHLSHKLDSFMGLGFSQATVVRVLEGFPSGLVTSGGEAVRVVEFLVEFGVPRDEIDRVVGLFPRVLGLGVEDRLKPLICELRGLGFSGREIRKEIVRDPRILGMEIGEFSRCLRLLETLKCREAIKERALGERLMRACFEVKLRVDCLCGHGLTRRDAFKVLWKEPRVITYDVGDIEKKIEFLMHRMKFSVDCLLDAPEYLGVNFEKQIVPRYNVVEYLEAKGAIGFEVGLKDLIKPSRLRFYNLYVKPYPECEKIYGRFSGDLQVKRKHPLGLWKLFKPHKFPESDEDVRNMKCFMDSLV* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0995 441 Pfam mTERF 283 381 IPR003690 GO:0003690|GO:0006355
Apr1g0995 441 Pfam mTERF 140 249 IPR003690 GO:0003690|GO:0006355
Apr1g0995 441 PANTHER CGI-12 PROTEIN-RELATED 51 438 IPR003690 GO:0003690|GO:0006355
Apr1g0995 441 SMART mt_12 299 330 IPR003690 GO:0003690|GO:0006355
Apr1g0995 441 SMART mt_12 331 362 IPR003690 GO:0003690|GO:0006355
Apr1g0995 441 SMART mt_12 127 156 IPR003690 GO:0003690|GO:0006355
Apr1g0995 441 SMART mt_12 54 84 IPR003690 GO:0003690|GO:0006355
Apr1g0995 441 SMART mt_12 161 191 IPR003690 GO:0003690|GO:0006355
Apr1g0995 441 SMART mt_12 232 262 IPR003690 GO:0003690|GO:0006355
Apr1g0995 441 SMART mt_12 196 227 IPR003690 GO:0003690|GO:0006355
Apr1g0995 441 Gene3D Transcription termination factor 3, mitochondrial 22 177 IPR038538 -
Apr1g0995 441 Gene3D Transcription termination factor 3, mitochondrial 178 400 IPR038538 -
Apr1g0995 441 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 51 438 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr1g0995 mTERF 1.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0995 - - cam:101513737 607.446