Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0992 ATGGAATCCACCATGTTACCCTCCATTGGATCTATTGCCTCTCGTGGTGCTGCTTGTACTGTCTTGCTCATGATACTGCTCTCTTGCTACACATTCAATTCTACAGAAGCCTATGATGCGCTTGATCCAACTGGCAACATAACAATCAAATGGGATGTCATTAGCTGGACTCCGGATGGCTACGTTGCTGTTGTTACAATGTACAACTTTCAACAATATCGCCATATTCAGGCCCCTGGGTGGTCATTAGGGTGGACATGGGCTAAAAAAGAAGTAATTTGGAACATGATGGGAGGCCAAACCACAGAGCAGGGGGACTGTTCAAAGTTCAAAGCTGGAATTCCACATTGTTGTAAGAAGGACCCAACAGTGGTGGATTTACTGCCAGGAACTCCTTACAACCAGCAGATTGCAAACTGTTGCAAAGCGGGAGTCTTGAATTCTTGGGCTCAGGACCCCAGCACAGCTGTAAGTTCTTTTCAGATTAGTGTTGGTTCTGCTGGAACAACCAACAGAACAGTAAAACTGCCTAAAAATTTTACCCTCAAAGCACCAGGACCTGGTTATACTTGTGGTCCAGCAAAAATTGTGAAACCAACAACATTTATTACCAATGACAAGAGGAGAATCACCCAAGCCATGATGACCTGGAATATAACCTGCACTTATTCTCAGTTCCTGGCTCAAAAGACACCAAGTTGTTGTGTTTCCCTCTCATCCTTTTACAATGAAACTATAGTAAACTGCCCCACCTGCACCTGTGGCTGCCAAAACAGAACAGAACCTGGCAGCTGTGTAAATCCAGACTCCCCACATTTAGCTTCAGTTGTATCATCATCCGGCAAAGCGATAAACACGCCTCTAGTTCAATGTACCAGTCATATGTGTCCTATTCGCGTGCATTGGCACGTGAAGGTCAATTACAAAGAGTACTGGAGGATCAAGATCACAATCACAAATTTCAATTATAGAATGAACTACTCGCAATGGAACCTTGTTGTGCAGCATCCCAATTTTGATAATCTTACCCAGCTCTTCAGCTTTCAGTACAAACCACTAACACCTTATGAAGGCTTGAATGATACAGGTATGCTGTGGGGGGTCAAGTTCTACAATGATTTTCTTTCTTCAGCTGGTCCCCTTGGTAATGTTCAGTCAGAACTCTTATTTAGAAAAGACAAATCAACCTTCACATTTGATAAGGGATGGGCCTTCCCCAGAAGGATTTATTTCAATGGAGATAACTGTGTTATGCCTCCTCCAGATGCCTATCCTTGGCTTCCAAATGCAAGTTCAAAACTAGTTTTCTCTTTATTAAGTACAGTCATAGCTATTTCAACTTCTTTGTTAATCTATTGA 1359 0.4268 MESTMLPSIGSIASRGAACTVLLMILLSCYTFNSTEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWSLGWTWAKKEVIWNMMGGQTTEQGDCSKFKAGIPHCCKKDPTVVDLLPGTPYNQQIANCCKAGVLNSWAQDPSTAVSSFQISVGSAGTTNRTVKLPKNFTLKAPGPGYTCGPAKIVKPTTFITNDKRRITQAMMTWNITCTYSQFLAQKTPSCCVSLSSFYNETIVNCPTCTCGCQNRTEPGSCVNPDSPHLASVVSSSGKAINTPLVQCTSHMCPIRVHWHVKVNYKEYWRIKITITNFNYRMNYSQWNLVVQHPNFDNLTQLFSFQYKPLTPYEGLNDTGMLWGVKFYNDFLSSAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSLLSTVIAISTSLLIY* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0992 452 PANTHER PROTEIN COBRA 14 450 IPR006918 GO:0010215|GO:0031225
Apr1g0992 452 PANTHER COBRA-LIKE PROTEIN 14 450 - -
Apr1g0992 452 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0031225
Apr1g0992 452 PIRSF COBRA 10 452 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0992 Apr-Chr1 15233671 15237038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0992 21 452 COBRA Gene Family AT3G02210 74.424 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0992 - - gmx:100815779 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0992 1 15233671 15237038 Apr1g0992 1 15233671 15237038 ECH