Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0991 ATGGAATTTGATAATGGTAAACAGCAGCAAAGGAAAAGCTCCACTTTCAGAGAGCTGAAGCTTGTTGCCGTTGTTGCTCTATGTCTCATTCTTATCTCTCCTGCTGAGTCATTTGATCCATTGGATCCAACTGGGAACGTGACAATAAGATGGGATATCGTGTCCTGGACATCAGATGGTTATTTGGCCACTGTGACACTGTTTAACTTCCAACTGTACCGGAATATTATGAATCCTGGGTGGACTATAGGATGGACATGGGCAAAGAAAGAAATAATATGGGCCATGATGGGAGCTCAAGCCACAGAACAAGGAGACTGTGCCAAGTTCAAGTTGAAGATTCCCCATAGCTGCAAGAGGAACCCTCAAGTGGTTGATTTGCTTCCTGGAGCTCCTTTCAACATGCAGTTTACCAACTGCTGCAGGGGTGGTGTGCTAACATCTTGGGGGCAGGACCCTTCAGGTGCAGTCTCAGCATTTCAGATTGGTGTGGGCCTCTCTGGCACCTCTAACAAGACTGTGAAACTGCCCAAGAACTTCAAATTGTTGGGACCAGGACCAGGATATTCATGTGGCCCTGCCAAGATTGTTCCATCCACTGTCATCCCCACAGATGATCATAGGCGAAAAACTCAAGCTTTGATGTCCTGGAATGTGACATGCACTTATTCACAGTTTCTTGCCTCCAAGAACCCAAGCTGTTGTGTTTCTCTGTCATCTTTCTACAGTGACAAAGTCACGGGTTGCCCAGCTTGTGCTTGTGGTTGTCAAAATAACGATACCTGCGTCACGAAGGATTCAAAGTTACTGCAAGAAGATGATGTCTTACCAAAACATAAAAAAGATACCACACCAAAACCATTGTTACAATGCACACACCATCTATGTCGTGTCCGGGTGCACTGGCATTTGAAAGACAACTATAAGGACTATTGGCGGGTCAAGATTGCCATCATCAACTTCAACTATCGGTTGAATTTCACTGAATGGACTCTTGTGGTGCAACACCCAAATCTCAATAATGTCACCCAAGTCTATAGCTTTGAATATATGCCACTTCTTCCGTATGAATCCATAAATGATACTGGTATGTTCTATGGTTTGAAATATTACAATGATCTGTTGATGGAAGCAGGGCCTAGAGGGAATGTTCAATCTGAGGTGCTCATGAAGAAGGATAAGAACACGTTTACCCTCAAACAGGGATGGGCATTCCCTAGAAGGGTCTACTTCAACGGTGATGAATGCATGCTGCCACCTCCTGATTCATACCCCATGTTGCCAAACTCTGCTCATACACTACAAACAAGTGTTATATTGATGGCAGTCAATGTAATTTTGGCATTACTTTTTCATTTGGTTGTTACTCTTTTGTGA 1377 0.4386 MEFDNGKQQQRKSSTFRELKLVAVVALCLILISPAESFDPLDPTGNVTIRWDIVSWTSDGYLATVTLFNFQLYRNIMNPGWTIGWTWAKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRNPQVVDLLPGAPFNMQFTNCCRGGVLTSWGQDPSGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKIVPSTVIPTDDHRRKTQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTGCPACACGCQNNDTCVTKDSKLLQEDDVLPKHKKDTTPKPLLQCTHHLCRVRVHWHLKDNYKDYWRVKIAIINFNYRLNFTEWTLVVQHPNLNNVTQVYSFEYMPLLPYESINDTGMFYGLKYYNDLLMEAGPRGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSAHTLQTSVILMAVNVILALLFHLVVTLL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0991 458 PIRSF COBRA 10 457 IPR006918 GO:0010215|GO:0031225
Apr1g0991 458 PANTHER COBRA-LIKE PROTEIN 1 457 - -
Apr1g0991 458 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0031225
Apr1g0991 458 PANTHER PROTEIN COBRA 1 457 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0991 Apr-Chr1 15196673 15198978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0991 13 452 COBRA Gene Family AT3G02210 58.239 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0991 - - gmx:100813134 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0991 1 15196673 15198978 Apr1g0991 1 15196673 15198978 ECH