Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0988 ATGGCAGCAAAACTCCTGCATTCTTTAGCAGATGACAACCCAGATCTGCAGAAGCAGATAGGATGTATGACTGGGATTTTCCAACTCTTTGATCGGCACCATATTCTCACGGCTCGCCGCATTAACCAGAAGAGGCTTCCTTCTGGTACTTCGCACTTCAGTGATGGCAGCTTAGAAAGAGATTCGGATACCATACACCATCCCCAGGCTGCTACTGATACTACTAGCTTAAACAAGGGTGTGAACGAAAGGCAAAGAATTTCAACAGAATCATCAAGAGCATCGTTCTCTTCGTGTTCATCATCAGTGTCCTCTCTGGACTGTAAGGCTGAAGCAGAGGCTGCAATGGACAGGATTGTTTTTCCTGAAACTCCTTCAAGGGATACAGTTACGAACCAACCAACCATCTCTCCCCATTTAGGACGTCACTCCCTTGACCTGAGGGATGTAGTGAAGGACTCTATGTATAGAGACGCTCGAGGACTGTCAGTGAAGACTACAGGCAGAGAGGAATCTGCCATTCATGCCATGAAACACAAGGATTCCCCGCGACCTATTCAGCTGTCCAAAACAGTTGATGGATCTTATGGAGTTGGAATAGATGGAAAACAAAGTGTGTCGATTGATCTAAAGGAATCTATCCGGGTCCTTGCTAAACTTAGAGAAGCACCTTGGTATTATGAAACCAAAGAACATCCAAGATCATCATATGAAGTAAAAGATGGACACTGGCATTCCCTCCCAAAGGAAGCTCCTTGGTTTGCTTATGAAGGAAAAGAAATAAGCCGTTTATCTTTTGAATCACGAGATACCATAAAATCCACACCAAAGCTGAAAGAGCTTCCTAGGCTTTCACTGGATAGTAAGGAAGGTTCATTGCGCTCAAGAAACATTTATGGTGGCACCTCTGCCTCCACCTCAAATGACAAATTCTCTAGCCCACATCAGTCTTCAGCAACCCCAAGTCGTCCACCTAGTGTTGTGGCAAAATTAATGGGCTTGGAAGCATTACCAGAGTCCTCTTTGGCTGGTGAAACTCAATCATGTTCAACTGAAACTTACTCAGTTCAAAGTAATGGTCAGTTTCCTTCCAAAAATGGACTCACCCGGCCACTCCGAGTTTCTGGTTCTCCAAAAATCTCACTGAAAGACCCAACTTCTCCTCGGAGAAAGAATCCTGATCTGGTTATGAAACCCATTTCAAGTTCAAGGTTCCCCATTGAACCAGCGCCGTGGAAGCAGCAGGATGGGGGAAACCGAAACTCACAAAAATCAAGTTTAAGGCCCACAAAAGTTCCAGCAAGGGCACCGGACTCATTTCCCTCAGTTTATAGTGAGATAGAGAAGAGATTGAAGGATCTCGAATTCAAACAATCTGGAAGGGATCTCAGAGCACTAAAACAGATACTGGAAGCAATGCAAGAAAAGGGGCTCTTGGAGAGCAGAAAAGAAGAACAAGCTCCAAATATTGTTGCAAGTCAAAGTGACTATGAACCAAAAGTTACCAATCTAATTCAGAATACCAGGTCAGTAAGGCAACAAAATCATCAGAGAAACAATTTTCTATCTTCCACGCTCAAGGGATCTGACTCAGATGGGGCTTTTGAATCCCCAATAGTGATAATGAAACCTGCAAAACTTATTGAGAAGACCGTGATTTGTTCTTCTCCAGTCATTCCAATTGGTGGCTTTTCTGGATCCCATAAACACCAAAATGGTGCTGTATATGTAGATAATAAGAACAGTATATCTACTCGAGTAGCGAAAGATCAGTCCCCTAGAAACATTCACCGGGATGCTTCTGCGAGTTCCACTGATAAGAAAGCAAGTGGTAGTAAGACTACAAGATCAGTACACTCTCAGTCTAGGTCTCAACAATTTCCCAAAGAAAATAGCCAAAGTTCAGTGAAGCACTCAGGATCTGTGAGCCCAAGATTGCATCCCAAGAAATTGGAGTTAGAGAAGCGGTCTCGTCCACCTGCCCCCCCATCAGATTCTAATAAACCCAGAAGGCAATCTGGTAAGAAGGTAACAGAATCAGGTTCACCAGGTGGAAAACTAAGACCCAAAACCCCCAACTTGCAGCATAGTGATGAACTATTGAGTGAGATGAGCAATGAATCAAGAAGTTTAAGCTGCCATGGGGATGAAGTTTCTCTGCAATCAGACAGTTTCTCTGTCAACTCAAAGATGGATGTGGAAGTCACTAGTAGTTTACAATCTGCTGAAATTGATAACAGCCAAAGCCCATCCTTAAAGGCTATGAAGCAAATGGTTTCAGAAACAGTCCAGAAAAAATCAGCTTCAAGATTGGACGAGGATGAAACAACTGCAGAACTTGCAACAAATGCCCCAGAACATCCTAGTCCTATCTCAGTTCTTGATGGTTCAGTCTACAGAGATGAGATGCCATCCCCAGTAAAGCAGATATCTGAAGATCCAAAAGGTGATGATACTCAAGAATCTAAAGAAAATGATATTAATGATCAGTGGAACGCTGCAGATAGCCTTACATATAACAGCACAGGAACTGGAGAGATCAATCGCAAAAAGTTACAGAGCATAGATCACCTTGTTCAGAAGCTTAGACGGCTGAACTCCAGTCACGATGAAGCTAGAATCGATTACATTGCTTCCCTATGCGAAAACACAAATCCAGACCACAGATACATCTCTGAGATATTATTAGCTTCAGGTCTCCTACTAAGAGATCTGAGTTCCGAATTGCTATCATTTCAAATTCACTCGTCGGGTTATCCCATTAACCCGGAGTTATTCCTTGTCTTGGAACAGACCAAGGCAAGTAGTTTACTTTCAAAGGAAGAAACCAGCCCTGGAAAAGTTGCATACTTGAAGCTAAATAAAGAAAAATTTCACAGGAAACTCATCTTTGATGCTGTGAATGAGATTCTTGGTGCAAAATTAGGCTCCTCCCTGGAGCCGTGGTTTCAGCCTAACAATAACAGACTCACAAAGAAACCCCTCAGTGCTCAAAAGCTTCTCAAAGAACTATGCTTTGAGATAGAGAAAATTCAAGCCAAGAAGCCAGAATGCTGCTTAGATAACGAAGATGATGGTCTGAAAAATATGCTGTGGGAAGATGTTACGCATGGCTCCGAAAGTTGGACAGATTTTCAAGGTGATTTACCTGCGGTTGTGTTGGATATTGAGAGACTCATATTTAAGGACTTGGTCGATGAGATTGTGATTGGCGAATCAGCTGGTTTGCGAGTCAAGTCATCAGTTAGGCGCAGGAAGCTATTTGGAAAGTAG 3273 0.4299 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHHILTARRINQKRLPSGTSHFSDGSLERDSDTIHHPQAATDTTSLNKGVNERQRISTESSRASFSSCSSSVSSLDCKAEAEAAMDRIVFPETPSRDTVTNQPTISPHLGRHSLDLRDVVKDSMYRDARGLSVKTTGREESAIHAMKHKDSPRPIQLSKTVDGSYGVGIDGKQSVSIDLKESIRVLAKLREAPWYYETKEHPRSSYEVKDGHWHSLPKEAPWFAYEGKEISRLSFESRDTIKSTPKLKELPRLSLDSKEGSLRSRNIYGGTSASTSNDKFSSPHQSSATPSRPPSVVAKLMGLEALPESSLAGETQSCSTETYSVQSNGQFPSKNGLTRPLRVSGSPKISLKDPTSPRRKNPDLVMKPISSSRFPIEPAPWKQQDGGNRNSQKSSLRPTKVPARAPDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKEEQAPNIVASQSDYEPKVTNLIQNTRSVRQQNHQRNNFLSSTLKGSDSDGAFESPIVIMKPAKLIEKTVICSSPVIPIGGFSGSHKHQNGAVYVDNKNSISTRVAKDQSPRNIHRDASASSTDKKASGSKTTRSVHSQSRSQQFPKENSQSSVKHSGSVSPRLHPKKLELEKRSRPPAPPSDSNKPRRQSGKKVTESGSPGGKLRPKTPNLQHSDELLSEMSNESRSLSCHGDEVSLQSDSFSVNSKMDVEVTSSLQSAEIDNSQSPSLKAMKQMVSETVQKKSASRLDEDETTAELATNAPEHPSPISVLDGSVYRDEMPSPVKQISEDPKGDDTQESKENDINDQWNAADSLTYNSTGTGEINRKKLQSIDHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYISEILLASGLLLRDLSSELLSFQIHSSGYPINPELFLVLEQTKASSLLSKEETSPGKVAYLKLNKEKFHRKLIFDAVNEILGAKLGSSLEPWFQPNNNRLTKKPLSAQKLLKELCFEIEKIQAKKPECCLDNEDDGLKNMLWEDVTHGSESWTDFQGDLPAVVLDIERLIFKDLVDEIVIGESAGLRVKSSVRRRKLFGK* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0988 1090 MobiDBLite consensus disorder prediction 695 765 - -
Apr1g0988 1090 MobiDBLite consensus disorder prediction 415 429 - -
Apr1g0988 1090 MobiDBLite consensus disorder prediction 339 439 - -
Apr1g0988 1090 Pfam Domain of unknown function (DUF4378) 887 1067 IPR025486 -
Apr1g0988 1090 MobiDBLite consensus disorder prediction 341 371 - -
Apr1g0988 1090 PANTHER LONGIFOLIA PROTEIN 1 1088 - -
Apr1g0988 1090 PANTHER LONGIFOLIA PROTEIN 1 1088 IPR033334 GO:0051513
Apr1g0988 1090 MobiDBLite consensus disorder prediction 605 641 - -
Apr1g0988 1090 MobiDBLite consensus disorder prediction 292 324 - -
Apr1g0988 1090 MobiDBLite consensus disorder prediction 645 661 - -
Apr1g0988 1090 MobiDBLite consensus disorder prediction 585 827 - -
Apr1g0988 1090 MobiDBLite consensus disorder prediction 292 325 - -
Apr1g0988 1090 Pfam DUF761-associated sequence motif 312 341 IPR032795 -
Apr1g0988 1090 MobiDBLite consensus disorder prediction 806 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0988 Apr-Chr1 15095200 15103666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0988 139 1089 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 47.395 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0988 - - gmx:100787391 1733.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0988 1 15095200 15103666 Apr1g0988 1 15095200 15103666 ECH