Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0987 ATGATGATAATGATGATGTCAAGTTCAAGAGAAGGTTATCAAGCCAAGCAAGAGGGTGACACCATTATTATTGACAAGTTCTCCAAGGCATCATCCACTTCCAGACAATGGTCAGGGTTCAGAAATCCAAGAATTGTGAGAGTATCACGTTCTTTTGGAGGAAAAGATAGACATAGCAAGGTTTGCACCATAAGAGGGTTGAGGGACAGAAGGATTAGGCTCTCAGTTCCCACAGCAATTCAGCTATACGATCTTCAAGACAAGCTTGGGCTCAACCAACCAAGCAAGGTAATAGATTGGTTGATTGAAGCCAGTAAATTTGACATTGACAAGCTCCCTCCACTTCAATTCCCTCAGGGTTTTTCTCAATTCCATCATCAACAAACCCTACTCCCTTTTCATGAATCAAGTGCCTCTCATCTTTCTCTTGGACCCTTTTGTGATGCTAACTCCACATTTGTAAGGGATGGCGGGATTCAAAACCTCATGGCAAGGCCAAGGTATTGGGATAATATAGATTCAATATCAAGAGTAAAAGGCAAGGAAGTTGAGAAAGGCAAGTGGATCAAAACAAATGAGCAAATAAATCAAGATGGTGTTGGTGGTTTCAACAGCTTGCAAGTTTCAACTCAGAAGCTTTTTCCAATGGGTACTACTGCTACTACTCCTCACTACTCTCCTTTACCTGTTGGTATGTTAAACAATGCCATGTCATATAATCCCTACCATTCTGAACCTTCTAGTCTTTCCTTATCCCAATTTGGAAGCCATGGATTGTTTCCTTCCCAGGTAGATCCGAATCCAAGCGGTGGCAATGGTGTGCCATTCCCATCTTCTTTGCCATTACCATCATCTGGTGGTTCCCAATTATTGTTTGGTCCATCTTCTGCTGCCACACCATCACTCTTCACTACCTATGCTCCATTTATGACCAACTCAGTGGACAATGATCCTAGACAATTCAACCATATTCAGTTCTTGAACTCAGGTTCTCAACTCTTGCCTCATCCTCTCATTCCATCTCTTCACTCATTCAATTCACCTGTCAGACCCTTCCCAGCAGCACCATTTAGTTCCAAGCTTTTGGATTCAGATAGCAACAACAACAATCGTAGCCAACAAGATAAGGGTAGCCCTTGTTCTTGA 1146 0.4241 MMIMMMSSSREGYQAKQEGDTIIIDKFSKASSTSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLNQPSKVIDWLIEASKFDIDKLPPLQFPQGFSQFHHQQTLLPFHESSASHLSLGPFCDANSTFVRDGGIQNLMARPRYWDNIDSISRVKGKEVEKGKWIKTNEQINQDGVGGFNSLQVSTQKLFPMGTTATTPHYSPLPVGMLNNAMSYNPYHSEPSSLSLSQFGSHGLFPSQVDPNPSGGNGVPFPSSLPLPSSGGSQLLFGPSSAATPSLFTTYAPFMTNSVDNDPRQFNHIQFLNSGSQLLPHPLIPSLHSFNSPVRPFPAAPFSSKLLDSDSNNNNRSQQDKGSPCS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0987 381 MobiDBLite consensus disorder prediction 356 381 - -
Apr1g0987 381 PANTHER TRANSCRIPTION FACTOR TCP17 4 376 - -
Apr1g0987 381 Pfam TCP family transcription factor 54 125 IPR017887 -
Apr1g0987 381 MobiDBLite consensus disorder prediction 360 381 - -
Apr1g0987 381 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
Apr1g0987 381 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 376 IPR005333 GO:0003700
Apr1g0987 381 MobiDBLite consensus disorder prediction 261 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0987 Apr-Chr1 15085067 15087328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0987 10 310 TCP Transcription Factor Family AT5G60970 44.795 1.79e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr1g0987 TCP 1.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0987 - - gmx:100788984 547.74