Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0982 ATGGAGGGACATAAATCTGTTGTCACTTCCTGTGAAGAGGACCAACATGTGGTTGCTGCTGCTCAGCACATTTTGAAGGCACTAGCAGCAAGTAAGACGGTTTCTGATGACATGAGGAAAACGCTGTTGGATATTGTGACCCAGTTGTCTACGATGTCCATAGTCAATGAGAGAAATGAAAGGGGCATGAAGCAATTAGAGAGGCAACTTAAGTGTGCTGAAGACACAGTAATGAGGTGGGAGACAAACCGCTCCATGATATGGGATTCTAGTCCTAGTGAGTCTTCTGAGTATTTGAAAGTTGTTGGTGATATCCAAGCTCTGACTCTGAGTTTGCAAAACCTTTCTCTGAAAGAGAATTGGAAGCAGAAGGAACTTCTTCAGCGCGCCAATGGGATTCTACAGGTTGCTATGTCAAGGCTTGAGGAAGAGTTAGTCCACATTTTTGTTCAACATAAGCAATATTTTGAGCCTGAATACATGTCTTTCTTTTCTAATAGGATGGATATGGTGTATGATGAATCATTTGGTTCAATTGAGGGTGAAAAAATCGAGGAGGCATCCCGGAGTAGTGGCGGTAATCAATCCCAGGCGAGCACTGTTGATTTGGTGAATCCAGCAATGCTTCAAGATCTAAAGACCATTGCAAATGTCATGTTTGCTTCAAAATACCATCAGGAATTCTGTCAGGTCTTTGTCACATCCAGGAGGGATGCCTTGGCTGAGTACTTTGTCATTCTTGAGATGGAGAAATTAAGCATTGAGAATGTGCTAAAATTGGAGTGGCATTGCTTAAACCATGAGATAAAGAAATGGATTCGCGCCATGAAGATCATTATTAGGGGATATCTTGTTAGCGAAAAACGTTTGTGTAAGCAGCTCCTTGGAGACTTTGGTTCATTTTATCAATTTTGCTTTTCTGAAATATCTCAGAGTTTTATGTTGCACCTTCTGAATTTTGGTGAGGCAGTGGCAATGTCAACACACACACCAGAAAAGTTGTTTTCTTTTCTAAACATGTATGAGGTTTTGGAGCATCTTTCTGTGGATGTGGACATCTTGTTCTTTGAAGAAGTTGGTTCTTTTGTTAGGGGAGAGTTTCACAAGCTTTTAAGGAGGTTTGGTGATGCTGTAAAGTCTACACTTAAGGCATTCAGAAATGCCATTGCAACTAACCCATCAAAGACCCGTTTTCCTGGAGGGGGTGTTCACCAGATTACCAAGTATGTGATGAATTACATCATGGCACTAGGTGGATATGCTGATACCCTTAATCTCCTTCTTGTTGATGAAAGTTCTATTGATCCTTCAGGCAATAAACATGACACTCCAGCTCTCTCATTGTGTCCAATGGCTTGCCATTTTCGGTCGATCACAAACGCTCTAGAATCCAACTTAAGCACCAAATCCAAGTTATATAAAGATGTGGCTTTGCAAAATATTTTCATGATGAATAACATTCATTACATGGTGCAGAAGGTTAAGTCCTCTGACCTAAGCCATTTCTTTGGTGATCGCTGGCTTCGCCAGCATGCTGGGAGGTTGCAACGCGATGCTAAAAGTTACGAGATGGTCACTTGGGGTTCAGTACTTTCTATGCTTAGAGATGGAAGTGTGTCAAATGTTTCACAGAGAACTTTGCAAAAAAGGTGCAAAGAGTTTAGCACTGCCTTTGGTGAAATATATAGGACTCAGACAGGGTGGTGTATCCCTGACCCTCAACTTCGTGAAGAACTTCAAATTTCAGTTTCCCAGAAAGTGGTTTCTGCTTATCGCACATACACTGGGAGACACTCATCCACCATTGCTGAAAAGTATATCAAATACACTGTGGAGGATCTCCAGACTTGTATTTTCGACCTTTTTCAAGGTGACCAAGACAATTAG 1887 0.4149 MEGHKSVVTSCEEDQHVVAAAQHILKALAASKTVSDDMRKTLLDIVTQLSTMSIVNERNERGMKQLERQLKCAEDTVMRWETNRSMIWDSSPSESSEYLKVVGDIQALTLSLQNLSLKENWKQKELLQRANGILQVAMSRLEEELVHIFVQHKQYFEPEYMSFFSNRMDMVYDESFGSIEGEKIEEASRSSGGNQSQASTVDLVNPAMLQDLKTIANVMFASKYHQEFCQVFVTSRRDALAEYFVILEMEKLSIENVLKLEWHCLNHEIKKWIRAMKIIIRGYLVSEKRLCKQLLGDFGSFYQFCFSEISQSFMLHLLNFGEAVAMSTHTPEKLFSFLNMYEVLEHLSVDVDILFFEEVGSFVRGEFHKLLRRFGDAVKSTLKAFRNAIATNPSKTRFPGGGVHQITKYVMNYIMALGGYADTLNLLLVDESSIDPSGNKHDTPALSLCPMACHFRSITNALESNLSTKSKLYKDVALQNIFMMNNIHYMVQKVKSSDLSHFFGDRWLRQHAGRLQRDAKSYEMVTWGSVLSMLRDGSVSNVSQRTLQKRCKEFSTAFGEIYRTQTGWCIPDPQLREELQISVSQKVVSAYRTYTGRHSSTIAEKYIKYTVEDLQTCIFDLFQGDQDN* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0982 628 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 23 626 - -
Apr1g0982 628 Coils Coil 56 83 - -
Apr1g0982 628 SUPERFAMILY Cullin repeat-like 88 622 IPR016159 -
Apr1g0982 628 Coils Coil 124 144 - -
Apr1g0982 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 626 IPR004140 GO:0000145|GO:0006887
Apr1g0982 628 Gene3D Exocyst complex component Exo70 78 628 - -
Apr1g0982 628 Pfam Exo70 exocyst complex subunit 270 618 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0982 Apr-Chr1 14903349 14910901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0982 14 623 EXO70 exocyst subunit family AT5G61010 43.922 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0982 K07195 - gmx:100791622 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0982 1 14903349 14910901 Apr1g0982 1 14903349 14910901 ECH