Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0951 ATGGGGTGCGTGAGTTCGAAGCAAGCGGTGTCGGTGACGCCAGCGATTGACCACTCGGGCGCGTTTCGGAGCAATGCGGGCGCAAGTGAGTCTGATAGGAAGGATAAGAAGAATAAGAAGAGGAGTGAGTCGGGTGGAGCAAGCCAGAGGGAGGTAGGTGAGTCGGGGAGAACGAGTTCGAATTGTGACTCCTTGAGCTTCAGGTTGGGGAACCTTCACAAGTACGTGCAAGGAGAACACGTGGCAGCCGGATGGCCGGCATGGCTCAGCGCCGTCGCCGGCGAAGCCATTCACGGCTGGGTTCCTCTGCGCGCCGATGCCTTTGAAAAACTGGAGAAGATAGGGCAGGGGACGTATAGCAGTGTGTTTCGGGCGAGGGAGCTTGAGACCGGGAAGATAGTGGCATTGAAGAAGGTGCGGTTCGATAATTTCGAACCGGAGAGCGTGCGGTTCATGGCGCGTGAGATCATGATTCTGAGACGGCTTGATCATCCCAATATCATAAAGCTTGAGGGCTTGATTACTTCGAGATTGTCGTGTAGCATATACCTCGTGTTTGAGTACATGGAGCATGATATTACAGGGCTCTTATCTTCCCCTGATATCAAGTTTAGTGAAGCACAGATTAAGTGCTACATGAAGCAGTTGTTGTCTGGGCTTGAGCATTGTCACTTGAGGGGAGTGATGCATAGGGACATTAAAGGGTCGAATCTTTTGGTGAATAATGAAGGGGTTTTGAAGGTGGCGGATTTTGGATTGGCCAATTTTGTGAGTTCTGGGCACAGGCAACCCCTTACTAGTCGAGTTGTCACCTTGTGGTACCGGCCGCCGGAGCTTTTGCTCGGTTCGACGGATTATGGACCGGCTGTGGATCTCTGGAGTGTTGGCTGCGTGTTTGCGGAGCTGCTTGTTGGGAAGCCTGTACTTCAGGGGAGAACGGAGGTTGAACAATTGCACAAAATTTTCAAGCTTTGTGGCTCCCCACCTGATGAATACTGGAAAAAGACTAGACTTCCTCATGCAACTTTGTTTAAGCCACAGCAACCATACGATAGTTGCCTTAGACAGTCCTTTAAAGAATTGCCTGCGACAAGTGTAAATCTGCTACAGGCTCTTCTTTCTGTTGAACCATTCAAACGTGGGACTGCCACATCTGCTCTCTCATCAGAGTATTTCAAAACCAAACCTTATGCATGTGATCCATCAAGCTTGCCGAAATACCCACCTAGCAAGGAAATCGATGCAAAACACAAGGAGGAGTCAAGGAAAAAGATCAGTGGACGAGTTCGTGGAACTGAAACCAGAAAACCGTCAAGAAAGCCACTAGGATTCAGTAAACTTGCCCCGGCAGAGGATTTGGCACAAACTCAGACTTCCCAAAAGGTCAATGGTAGATCTTTCCGCATCCTTGAAGAAGAGAAGACTAACATAGGTGACAAGGCACAAAAGCCATCCGGTGTTAAACCTGAAGATGCTTCTCATGTTAAGAATGCATCTCAAGGAGATATTCCCTTTTCCGGACCATTACAAGTTTCAACATCAAGTGGCTTTGCTTGGGCAAAAGGCCGTAAAGATGACATTTCATTTCGATCCCATTGTCGTACTATATCAAGAGGGCATATTTTCAATCCATTAGAACATTCTACATTAAATTCAAGAAATAATTTGGACACCACAAACCAGGAAAATAAGGAGTTTTTTGGAGGGCGCACCTATACCCGGGCCAATGACCTAAATGAAATTTCTAAGCTTTCAATGCAGAACCAGTGGAGTAAGTTTGATCGGCCAGACTCATTTGATGCTTCTGATGAGTACCACTCGCAAGAATTGTCTATGGCCCTTTATCAAAGAGAAGATTCAGCATCCAAGAGAAGTAACATGTGTTTCCAAGATCAAGGAGAGAAGGTTGAATTTTCTGGACCCCTACTATCACAAATGCACACAGTTGACGAGCTTTTAGAAAGGCACGAGCGTCACATCCGGCGAACTGTCCGTAGATCATGGTTTCAAAGAGGTAAGAAGCACGGGAAGTAA 2034 0.4735 MGCVSSKQAVSVTPAIDHSGAFRSNAGASESDRKDKKNKKRSESGGASQREVGESGRTSSNCDSLSFRLGNLHKYVQGEHVAAGWPAWLSAVAGEAIHGWVPLRADAFEKLEKIGQGTYSSVFRARELETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSSPDIKFSEAQIKCYMKQLLSGLEHCHLRGVMHRDIKGSNLLVNNEGVLKVADFGLANFVSSGHRQPLTSRVVTLWYRPPELLLGSTDYGPAVDLWSVGCVFAELLVGKPVLQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQPYDSCLRQSFKELPATSVNLLQALLSVEPFKRGTATSALSSEYFKTKPYACDPSSLPKYPPSKEIDAKHKEESRKKISGRVRGTETRKPSRKPLGFSKLAPAEDLAQTQTSQKVNGRSFRILEEEKTNIGDKAQKPSGVKPEDASHVKNASQGDIPFSGPLQVSTSSGFAWAKGRKDDISFRSHCRTISRGHIFNPLEHSTLNSRNNLDTTNQENKEFFGGRTYTRANDLNEISKLSMQNQWSKFDRPDSFDASDEYHSQELSMALYQREDSASKRSNMCFQDQGEKVEFSGPLLSQMHTVDELLERHERHIRRTVRRSWFQRGKKHGK* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0951 677 Pfam Protein kinase domain 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0951 677 ProSiteProfiles Protein kinase domain profile. 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0951 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Apr1g0951 677 Gene3D Transferase(Phosphotransferase) domain 1 191 430 - -
Apr1g0951 677 CDD STKc_CDK9_like 108 392 - -
Apr1g0951 677 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Apr1g0951 677 MobiDBLite consensus disorder prediction 479 507 - -
Apr1g0951 677 Gene3D Phosphorylase Kinase; domain 1 95 190 - -
Apr1g0951 677 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 670 - -
Apr1g0951 677 SUPERFAMILY Protein kinase-like (PK-like) 101 399 IPR011009 -
Apr1g0951 677 SMART serkin_6 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0951 677 MobiDBLite consensus disorder prediction 403 461 - -
Apr1g0951 677 MobiDBLite consensus disorder prediction 1 61 - -
Apr1g0951 677 MobiDBLite consensus disorder prediction 410 440 - -
Apr1g0951 677 PANTHER CELL DIVISION PROTEIN KINASE 1 670 - -
Apr1g0951 677 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0951 Apr-Chr1 13808704 13815896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0951 100 459 Core Cell Cycle Gene Families AT5G10270 47.872 7.06e-116 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Apr1g0951 Pkinase 7.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0951 - - gmx:100803328 1238.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0951 1 13808704 13815896 Apr9g2979 9 36683205 36689480 ECH
Apr1g0951 1 13808704 13815896 Apr1g0951 1 13808704 13815896 ECH